Pairwise Alignments

Query, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 370 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Pseudomonas stutzeri RCH2

 Score =  422 bits (1086), Expect = e-123
 Identities = 215/364 (59%), Positives = 274/364 (75%), Gaps = 1/364 (0%)

Query: 12  IYRRKSRQIHVGPVPIGGDAPIAVQTMTNTLTTDIPGTIAQVQAAADAGADIVRVSVPDV 71
           I RR+SR+I VG VP+GGDAPI+VQ+MTNT T D+  T+AQ+Q  A+AGADIVRVSVP +
Sbjct: 7   IKRRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSM 66

Query: 72  DSSRALKEIVRESPVPIVADIHFHYKRGIEAAEAGAACLRINPGNIGDEKRVKEVIKAAR 131
           +++ A   I R   +P+VADIHF Y+  +  AE G  CLRINPGNIG E RV+ V+ AAR
Sbjct: 67  EAAEAFGRIKRLVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGREDRVRAVVDAAR 126

Query: 132 DNNCSMRIGVNAGSLEKHLLDKYAEPCPEAMVESALDHIKILQDNDFHEFKISCKASDVF 191
           D    +RIGVNAGSLEK L  KY EP P+A+VESAL H+  L   DF +FK+S KASDVF
Sbjct: 127 DKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESALRHVDHLDRLDFQDFKVSVKASDVF 186

Query: 192 LSAAAYQALADATDAPLHLGITEAGGLMSGTIKSAIGLGNLLWMGIGDTIRVSLSADPVE 251
           ++  AY+ LA   + PLHLGITEAGGL SGT+KSA+GLG LL  GIGDTIRVSL+ADPVE
Sbjct: 187 MAVEAYRLLAGQIEQPLHLGITEAGGLRSGTVKSAVGLGMLLADGIGDTIRVSLAADPVE 246

Query: 252 EIKVGYDILKSLGLRHRGVNVISCPSCARQGFDVIKTVEALEQRLEHIKTPMSLSIIGCV 311
           EIKVG+DILKSL LR RG+N I+CPSC+RQ FDV+KT+  LE R+E +  PM +++IGCV
Sbjct: 247 EIKVGFDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEARVEDLLVPMDVAVIGCV 306

Query: 312 VNGPGEALMTDVGFTGGGAGSGMVYLAGKQSHKMSNEQMIDHIVEQVEKRAAELDAIEAA 371
           VNGPGEA    VG T GG+ + +VY+ GK + K++NE ++D + + + ++AAE  A +AA
Sbjct: 307 VNGPGEAKEAHVGLT-GGSPNNLVYIDGKPAQKLNNENLVDELEQLIRRKAAEKLASDAA 365

Query: 372 EAAQ 375
             A+
Sbjct: 366 VIAR 369