Pairwise Alignments

Query, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 363 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  335 bits (858), Expect = 2e-96
 Identities = 161/329 (48%), Positives = 231/329 (70%), Gaps = 1/329 (0%)

Query: 12  IYRRKSRQIHVGPVPIGGDAPIAVQTMTNTLTTDIPGTIAQVQAAADAGADIVRVSVPDV 71
           I RR++R++ +G V IGGD P+ VQ+M NT T D+  T+ Q++A A  G ++VR++V + 
Sbjct: 3   IERRRTREVRIGSVRIGGDNPVVVQSMANTDTRDVDATVGQIRALAAVGCEVVRLAVLNE 62

Query: 72  DSSRALKEIVRESPVPIVADIHFHYKRGIEAAEAGAACLRINPGNIGDEKRVKEVIKAAR 131
            ++ A+  I   SPVP+VADIHF ++  + A EAG   LRINPGNIG E  V  V+ AAR
Sbjct: 63  AAAAAIGPIRAASPVPLVADIHFDHRLAVAALEAGVDALRINPGNIGGEANVARVVDAAR 122

Query: 132 DNNCSMRIGVNAGSLEKHLLDKYAEPCPEAMVESALDHIKILQDNDFHEFKISCKASDVF 191
                +R+GVN+GS+EKHLL+++  P PEAMVESAL H+++L+D  F + KIS K+S V 
Sbjct: 123 ARGACIRVGVNSGSVEKHLLERFGGPTPEAMVESALGHVRMLEDRGFGDIKISLKSSSVL 182

Query: 192 LSAAAYQALADATDAPLHLGITEAGGLMSGTIKSAIGLGNLLWMGIGDTIRVSLSADPVE 251
            +  AY+ LA+  D PLH+G+TEAG ++ G++KS++GLG LLW+GIGDT+RVSL++DPVE
Sbjct: 183 HTIDAYRVLAERCDYPLHIGVTEAGTMLRGSVKSSVGLGVLLWLGIGDTLRVSLTSDPVE 242

Query: 252 EIKVGYDILKSLGLRHRGVNVISCPSCARQGFDVIKTVEALEQRLEHIKTPMSLSIIGCV 311
           EI V ++IL+SLGLRHRG  +ISCP+C R    +I   + +E+RL        ++++GC 
Sbjct: 243 EIPVAWEILRSLGLRHRGPEIISCPTCGRTEIGLISLAQEVERRLAGETENFKVAVMGCA 302

Query: 312 VNGPGEALMTDVGFTGGGAGSGMVYLAGK 340
           VNGPGEA   D+G   GG   G+++  G+
Sbjct: 303 VNGPGEAREADIGI-AGGRDKGIIFRKGE 330