Pairwise Alignments

Query, 176 a.a., Tetratricopeptide TPR_2 repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 602 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score = 43.9 bits (102), Expect = 5e-09
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 1/104 (0%)

Query: 43  QAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYPDYVPGW 102
           Q G+++ A     RA       A   S  G     LG L+++     +A++  PD+    
Sbjct: 66  QRGDHDTAASLMSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAH 125

Query: 103 NNLGVLLMEKGDYGEASRVFRQAFALDSGNSDDIRNNLSLALEK 146
           NN GV L  +GD  EA   +R A A  +    D R NL  AL K
Sbjct: 126 NNFGVALQAQGDLSEAIEQYRLALA-SNPMLLDARLNLGTALSK 168



 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 24  ALASDGAAVDGVL-VGNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLN 82
           ALAS+   +D  L +G  L + G ++ AL  +  A +    +AE    +G+A+   G   
Sbjct: 148 ALASNPMLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGDHG 207

Query: 83  QSETLLRRAVEEYPDYVPGWNNLGVLLMEKGDYGEASRVFRQAFAL 128
            +     RA+    +Y     NLG L+ + GDY  A   +R+A AL
Sbjct: 208 AAIASFERALSLRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVAL 253



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 6/140 (4%)

Query: 37  VGNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYP 96
           VGN     G++  A+ +F RA + +    E    +GS   KLG    +E   RRAV   P
Sbjct: 196 VGNAHKARGDHGAAIASFERALSLRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVALKP 255

Query: 97  DYVPGWNNLGVLLMEKGDYGEASRVFRQAFALDSGNSDDIRNNLSLALEKRDALRYSQPS 156
           +       LG  L  +G   E    +RQA ALD  +  D   NL+  L KR   R     
Sbjct: 256 N-PTHLVCLGGSLGAQGRLDEEEGFYRQALALDP-HYADAHQNLAWLLLKRGDYRQGW-- 311

Query: 157 ENKEFDLVWQGNGSYALISP 176
              EF L W+ +   A+  P
Sbjct: 312 --AEFALRWRKSDYDAIAVP 329



 Score = 33.5 bits (75), Expect = 7e-06
 Identities = 24/91 (26%), Positives = 38/91 (41%)

Query: 38  GNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYPD 97
           G  L   G+   A+  +  A A   M  +    +G+A  KLG  + +    R A+   P 
Sbjct: 129 GVALQAQGDLSEAIEQYRLALASNPMLLDARLNLGTALSKLGHFDDALACYREALSLDPT 188

Query: 98  YVPGWNNLGVLLMEKGDYGEASRVFRQAFAL 128
                 N+G     +GD+G A   F +A +L
Sbjct: 189 SAEAHFNVGNAHKARGDHGAAIASFERALSL 219



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 79  GRLNQSETLLRRAVEEYPDYVPGWNNLGVLLMEKGDYGEASRVFRQAFALD 129
           GRL+ +E+L R  +   P +    +  GVL  ++GD+  A+ +  +A  LD
Sbjct: 34  GRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASLMSRALKLD 84



 Score = 29.3 bits (64), Expect = 1e-04
 Identities = 22/90 (24%), Positives = 42/90 (46%)

Query: 45  GEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYPDYVPGWNN 104
           G  + A+  + +A   Q   A+  +  G A    G L+++    R A+   P  +    N
Sbjct: 102 GHLDEAMICYDQALQLQPDFADAHNNFGVALQAQGDLSEAIEQYRLALASNPMLLDARLN 161

Query: 105 LGVLLMEKGDYGEASRVFRQAFALDSGNSD 134
           LG  L + G + +A   +R+A +LD  +++
Sbjct: 162 LGTALSKLGHFDDALACYREALSLDPTSAE 191