Pairwise Alignments

Query, 807 a.a., DNA damage response helicase, ligase-associated (from data) from Dinoroseobacter shibae DFL-12

Subject, 1513 a.a., Probable ATP-dependent helicase Lhr (large helicase-related protein) from Mycobacterium tuberculosis H37Rv

 Score =  258 bits (660), Expect = 1e-72
 Identities = 198/534 (37%), Positives = 267/534 (50%), Gaps = 66/534 (12%)

Query: 41  LLIAPTGGGKTLAGFLPTLAEL-GPAP----PPGLHTLYISPLKALAADIKRNLRRPI-- 93
           L+IAPTG GKTLA FL  L  L G  P    P     LY+SPLKALA D++RNLR P+  
Sbjct: 45  LVIAPTGSGKTLAAFLWALDSLAGSEPMSERPAATRVLYVSPLKALAVDVERNLRTPLAG 104

Query: 94  -----EEAGLA---IRVEDRTGDTSQTQRKRQRADPPHILLTTPESLALMLSYEDAARTF 145
                E  GL    IRV  R+GDT    R++  + PP +L+TTPESL LML+   A +T 
Sbjct: 105 LTRLAERQGLPAPQIRVGVRSGDTPPALRRQLVSQPPDVLITTPESLFLMLT-SAARQTL 163

Query: 146 AGVQRVIVDEIHALAESKRGDQLMLGLARLQSLVPGLR--RVGLSATVEDPPAIARFLAR 203
            GVQ VI+DEIHA+A +KRG  L L L RL  L    R  R+GLSATV  P  +ARFL+ 
Sbjct: 164 TGVQTVIIDEIHAIAATKRGAHLALSLERLDDLSSRRRAQRIGLSATVRPPEELARFLSG 223

Query: 204 H--------PDPCDILLADPGPAPDITMLQTDEAPPWSGGGGRYAIPAILQAVKAHKTTL 255
                    P    + L+   P PD+  L TD    W     R     ++  +++H +T+
Sbjct: 224 QSPTTIVAPPAAKTVELSVQVPVPDMANL-TDNT-IWPDVEAR-----LVDLIESHNSTI 276

Query: 256 IFHNTRAQAELF------FHALWLANE------------------------DALPI--GI 283
           +F N+R  AE         HA     E                         A P+    
Sbjct: 277 VFANSRRLAERLTARLNEIHAARCGIELAPDTNQQVAGGAPAHIMGSGQTFGAPPVLARA 336

Query: 284 HHGSLSREQRQRVEAAMAEGALRAIVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIG 343
           HHGS+S+EQR  VE  +  G L+A+V T SL+LGID G VDLVIQV AP +V   +QRIG
Sbjct: 337 HHGSISKEQRAVVEEDLKRGQLKAVVATSSLELGIDMGAVDLVIQVQAPPSVASGLQRIG 396

Query: 344 RANHRYNAPSKALLVPANRFEVVECHAALKTMADGKLDGEPRAEGPRDVLCQHILAVAAA 403
           RA H+    S+ +L P +R +++ C  +++ M  G+++       P D+L QH +A AA 
Sbjct: 397 RAGHQVGEISRGVLFPKHRTDLLGCAVSVQRMLAGEIETMRVPANPLDILAQHTVAAAAL 456

Query: 404 GPFDADALFAEVTSAGAYRDLTRPAFDDCLEFCATGGYALRAYDRWQRLLHRPDGMWQLR 463
            P DADA F  V  A  +  L R  F+  L+  +    +    +   RL++  D      
Sbjct: 457 EPLDADAWFDTVRRAAPFATLPRSLFEATLDLLSGKYPSTEFAELRPRLVYDRDTGTLTA 516

Query: 464 DPRAARQIRMNIGTIIDTETLKVRLKNRRGGTPLGEVEEGFAATLTPGDTFLIG 517
            P A R    + G I D     V L   R  + +GE++E       PGD   +G
Sbjct: 517 RPGAQRLAVTSGGAIPDRGLFAVYLATER-PSRVGELDEEMVYESRPGDVISLG 569



 Score = 37.7 bits (86), Expect = 5e-06
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 676 LSGNAVMKRTFRAAAIIAGLIDRNTPGRRKTGRQATFSSDILYDTLLKYDPDHVLMQITR 735
           ++G+A+    FR +A  A L+ R  PGRR    Q    +  L +   KY PD  ++  T 
Sbjct: 754 VAGSALFASRFRESAARALLLPRRHPGRRSPLWQQRQRAARLLEVARKY-PDFPIVLETV 812

Query: 736 EEARRGLVDFGRIEELLARTTG---RVDHRRLDRISPLAAPLL 775
            E  + + D   + EL+AR      RV      + SP AA LL
Sbjct: 813 RECLQDVYDVPILVELMARIAQRRVRVAEAETAKPSPFAASLL 855