Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 361 a.a., HlyD family-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 35/340 (10%)

Query: 27  AQERPAA-VVTETVEERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLVGDRVAEGA 85
           A+ RP   VV   V  + + + +   G   A+    + ++   +  +V    GD V  G 
Sbjct: 30  ARPRPVPNVVVTKVATQEVRDEVEALGTTHANESVTITAKVTDVATKVNFSDGDIVRAGQ 89

Query: 86  TLAVLDTELAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNTASFSSARFD 145
            L  L                AE RA + VA+ ++   +   DR+  L  + + +    D
Sbjct: 90  LLVQLQD--------------AEQRARVQVAKVKVIDNQREFDRIRSLVTSQTVAELERD 135

Query: 146 DAMSDLAAATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVAADPGQFISV 205
              + +  +  EL QA + L              DRA ITAPFAG +      PG  ++ 
Sbjct: 136 RLQTLIDTSRAELEQAESALR-------------DRA-ITAPFAGRLGLRQVSPGALVTP 181

Query: 206 GDPIARIIDINALEIEAQVPSQFAPAIPPG--VTVKGVSEAGQQLDLQIRAILPTESVST 263
           G  +  + DI+ ++++  VP +F P + PG  V  + V+  GQ    ++ +I     V+ 
Sbjct: 182 GTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFTGKVTSI--DSRVNP 239

Query: 264 RTRPVRLSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQ-GAQGWTVFVDADG 322
            TR V +  ++    A L  G  + +++ +   R A+ VP+ A++    + +   V AD 
Sbjct: 240 STRAVTVRAEIPNPDAKLLPGMLMKIRL-IKTSREAIMVPESAIIPLQNRHYVYMVGADN 298

Query: 323 IAEPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPG 362
             + R V IG+      E++ GLA G+ +++RG  ++RPG
Sbjct: 299 KVDRREVTIGLRKRGWAEIVDGLALGETIMIRGILKVRPG 338