Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  108 bits (269), Expect = 4e-28
 Identities = 95/371 (25%), Positives = 151/371 (40%), Gaps = 32/371 (8%)

Query: 27  AQERPAAVVTETVEERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLVGDRVAEGAT 86
           A   P  V T     +++ +     G + ++    +   TAG +  +    G  VA+G  
Sbjct: 50  APAAPLPVETALAAPQSITDEAAAVGTLRSNESVVLRPETAGRIASIGFKDGVPVAKGTV 109

Query: 87  LAVLDTELAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNTASFSSARFDD 146
           L  LD    + EL+QA A+ A A                    V   + T    + +F  
Sbjct: 110 LVALDAATQEAELQQAKANHALA--------------------VTNFKRTEELLAKKFIS 149

Query: 147 AMSDLAAATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVAADPGQFISVG 206
             S        L+   A L   EAA   A   L + RI APFAGVV       G ++  G
Sbjct: 150 QQS--------LDTTAANLKVQEAAVALAEAKLAKTRIRAPFAGVVGIREVSVGDYVKEG 201

Query: 207 DPIARIIDINALEIEAQVPSQFAPAIPPGVTVKGVSEA--GQQLDLQIRAILPTESVSTR 264
             +  + DI  L+++ ++P  +   +  G  V+   +A   Q     + A+ P   V   
Sbjct: 202 ADLINLEDIRTLKLDFRLPELYLSRLQKGQAVEVSVDALPNQAFKAVLDAVDPL--VDAN 259

Query: 265 TRPVRLSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQGAQGWTVFVDADGIA 324
            R + L   LD     L  G    +++        L +P+ A+V G    TVF   +G A
Sbjct: 260 GRAISLRARLDNPELKLRPGMFARVRLLFGNRDGVLMIPEQAIVSGGGKQTVFRIEEGKA 319

Query: 325 EPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQALQAVDGAPGGGAPEEGARTP 384
           +   V+ G+    + E+LSGLA GD ++  G  +++ G  ++AVD AP      EG    
Sbjct: 320 KKVEVKTGLRRNAQVEILSGLAAGDRIITAGQLKVQDGSPVKAVDAAPQPAQDAEGTGIS 379

Query: 385 DDTQSRAAPQS 395
               + AAPQ+
Sbjct: 380 KPPATTAAPQA 390