Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  106 bits (264), Expect = 1e-27
 Identities = 109/371 (29%), Positives = 161/371 (43%), Gaps = 31/371 (8%)

Query: 24  PLFAQERPAAVVTETVEERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLVGDRVAE 83
           P   + RPA  +T+ V     ++ L V G+V A  ++    R  G V E  V +G  V +
Sbjct: 25  PKAPEPRPA--LTQVVGAAGQSDMLWV-GEVRARYETDQGFRIGGKVVERKVDIGAVVKK 81

Query: 84  GATLAVLDTELAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNTASFSSAR 143
           G  LA LD   A +    A A    A A   VA+A+        +R + L      S + 
Sbjct: 82  GQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEY-------ERQKKLLEKQFISQSA 134

Query: 144 FDDAMSDLAAATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVAADPGQFI 203
           FD   +   AA   L+QARA+   A     +A YT     + A   GVV  V  +PGQ +
Sbjct: 135 FDSREAQFKAALARLDQARAQ---AAVTGNQAGYT----DLVAEKDGVVTDVKVEPGQVV 187

Query: 204 SVGDPIARIIDINALEIEAQVPSQFAPAIPPGVT--VKGVSEAGQQLDLQIRAILPTESV 261
           S G P  R+      E+   VP      I PG +  ++  +   Q    ++R + P    
Sbjct: 188 SAGQPAIRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARVREVAPAADA 247

Query: 262 STRTRPVRLSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQGAQGWTVFV--D 319
           +TR+  V+++     L     +   +T  V + +  A L VP  AL +     TV+V   
Sbjct: 248 ATRSFQVKVT----VLEPDAGLRLGMTAGVLIGSAEAPLLVPTAALTRQDGKNTVWVVNP 303

Query: 320 ADGIAEPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQALQAVDGA------PG 373
             G  +PR V  G    D   V  GLA G+ VV+ G  +L+PGQ ++AV+ +       G
Sbjct: 304 QSGEVQPRSVTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLVRAVEPSNVPLPMVG 363

Query: 374 GGAPEEGARTP 384
           GG     A TP
Sbjct: 364 GGGAGPVAATP 374