Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 405 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  112 bits (281), Expect = 1e-29
 Identities = 103/373 (27%), Positives = 167/373 (44%), Gaps = 46/373 (12%)

Query: 34  VVTETVEERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLVGDRVAEGATLAVLDTE 93
           VV + V+ R L  T    GQ   SR+  V +R  GI+   A   G  V +G  +  +D E
Sbjct: 41  VVVQQVQPRDLPLTYEYVGQTAGSREVEVRARVGGILLRRAYAEGRPVKKGDLMFDIDPE 100

Query: 94  LAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNTASFSSARFDDAMSDLAA 153
             + +L+QAL   A+       AEA+L  A+  RDRV  L    + S    DDA+++  +
Sbjct: 101 PFKADLDQALGQQAQ-------AEARLQSAQSNRDRVLPLYRENAVSQKDRDDAVAEFDS 153

Query: 154 ATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVAADPGQFISV---GDPIA 210
           A   L +ARAR+       + AR  L   R+ AP +G+        G  ++    G  + 
Sbjct: 154 AKAALEEARARV-------KTARINLGYTRVEAPISGMTSKETRSEGSLVTTTAEGSLLT 206

Query: 211 RIIDINALEIEAQVPSQ--------------FAPAIPPGVTVKGVSEAGQQLDLQIRAIL 256
            I  ++ + +    PS                 P     VTV+ +  +  +    +  I 
Sbjct: 207 TISKVDPVYVNFSAPSVDLFRLRRMREEGRITLPKKSYEVTVRLIDGSTYKRTGTVNFID 266

Query: 257 PTESVSTRTRPVRLSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQGAQGWTV 316
           P   V   T  +R+  +     A +  GQ + + +  +    ALA+P+ A++Q  QG  V
Sbjct: 267 PL--VDPLTGTIRVRAEFPNPEAEVLPGQFVRVLMTGAVYNNALAIPQRAVLQTQQGPMV 324

Query: 317 FVDADG-IAEPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQAL---------- 365
           +V  +G +A+PRPV I + + +++ V  GLA G+ +VV G  ++RPGQ +          
Sbjct: 325 WVIGEGDVAQPRPVEISLPIDNQYIVEKGLAPGERIVVEGLLKVRPGQPVTIGQPREAQT 384

Query: 366 --QAVDGAPGGGA 376
                +GAP G A
Sbjct: 385 GQNGQNGAPAGNA 397