Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 374 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 83/341 (24%), Positives = 146/341 (42%), Gaps = 33/341 (9%)

Query: 31  PAAVVTETVEERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLVGDRVAEGATLAVL 90
           P AV    V  +  ++ + + G +  ++ +++AS   G +  + V  GD V         
Sbjct: 53  PPAVSLFKVTNQTFSQYIVLTGTIEPTKVASLASPAEGPILNLVVREGDTV--------- 103

Query: 91  DTELAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNTASFSSARFDDAMSD 150
                   L Q +  I    A  ++   Q   AE+ R +V  L+        R +  +  
Sbjct: 104 -------NLGQEILRIGRTHAADSL---QTSAAEEVRKQVLNLK--------RIETLVKQ 145

Query: 151 LAAATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVAADPGQFISVGDPIA 210
                 +L++A + L  A+AA  +A+  L+   +T P++G++  V    G F+    P+ 
Sbjct: 146 HTLPEEQLDEALSSLEKAKAALSQAKQALNDYIVTVPWSGIISKVLVSDGHFVIPRSPLV 205

Query: 211 RIIDINALEIEAQVPSQFAPAIPPGVTVKGVSE--AGQQLDLQIRAILPTESVSTRTRPV 268
            + D ++L +   V    A  +  G  VK   +  AGQ+ +L+I    P      RTR  
Sbjct: 206 EMYDPDSLVLRFSVAEAQALVLKKGHKVKATFDGLAGQEFELEIIRAYPDLDRKLRTRLF 265

Query: 269 RLSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQGAQGWTVFVDADGIAEPRP 328
             S   +        G    ++V     +  L +P D L    +  +VFV  D I   R 
Sbjct: 266 EASLPANEF----IPGMFARIRVVQQEHKNTLVIPIDTLQVQGKDKSVFVVTDNIVTRRL 321

Query: 329 VRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQALQAVD 369
           V  G+   D+ EVLSGL  G+ +V+ G ER++ G A++ ++
Sbjct: 322 VETGLEQDDQIEVLSGLKAGEIIVLTGIERVKNGSAVRVLE 362