Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 370 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 38/344 (11%)

Query: 30  RPAAVVTETVEERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLVGDRVAEGATLAV 89
           R   VVT  V E  LA+++ + G++ A R   +A +  G + ++AV     V +G  L  
Sbjct: 37  RTVPVVTGEVVEHPLAQSISLIGKLAADRAVVIAPQVTGKIKQIAVTSNQAVKKGQLLIE 96

Query: 90  LDTELAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNTASFSSARFDDAMS 149
           LD   AQ       A +AEA A +              D    LR      S R     +
Sbjct: 97  LDDMKAQ-------AAVAEANAFL-------------NDETRKLREFEKLIS-RNAITQT 135

Query: 150 DLAAATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVAADPGQFISVGDPI 209
           ++ A    ++ ARARL +A+A        L    + APFAG    +    G+ +S+G  +
Sbjct: 136 EIDAQKASVDIARARLASAQA-------DLHYHSLIAPFAGKTGLINFSEGKMVSIGTEL 188

Query: 210 ARIIDINALEIEAQVPSQFAPAIPPGVTVKGVSEA--GQQLDLQIRAILPTESVSTRTRP 267
             + D++++ ++ QVP  F   +  G+ V   S A  G+    ++ AI P  +  T    
Sbjct: 189 MTLDDLSSMRLDLQVPEHFLSQLSIGMPVSATSRAWPGETFIGKVVAIDPRVNEETLNLK 248

Query: 268 VRLSGD--LDALGATLAVGQSITLQVPVSAPRAALAVPKDAL-VQGAQGWTVFVDADGIA 324
           +R+  +   + L   + +  ++T   P+SAP     VP  AL   G + +   V  D IA
Sbjct: 249 IRVQFENAKNRLKPGMMMSSTLTFP-PISAP----IVPVQALEYSGTKRYVYVVGEDHIA 303

Query: 325 EPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQALQAV 368
               V +G  +GD+  + SGL  GD VVV+G   +R G  +  V
Sbjct: 304 HRTEVILGARVGDQVLIDSGLKIGDKVVVQGLVNMRDGLKINEV 347