Pairwise Alignments

Query, 527 a.a., extracellular solute-binding protein family 5 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 526 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  300 bits (769), Expect = 7e-86
 Identities = 178/514 (34%), Positives = 265/514 (51%), Gaps = 13/514 (2%)

Query: 11  SALVLTPILA---SAETLRWARAGDSLTLDPHAQNEGPTHTLAHQIYEPLIIRDHFGQFQ 67
           +A +  P LA   SA TLRW    D  +LDP +          + IYE LI      + +
Sbjct: 14  AAAIAAPALATSASAATLRWGSRADIYSLDPDSVPSTSNLAFLNHIYEGLIRYGPNFEIE 73

Query: 68  GALATEWAPKPDDPSVWVFKLREGVTFHDGSAFTAEDVVFSFERAKSETSAMKELLTSIS 127
            ALATEW  K  D   W F LR+GV FHDG+ FTA+DVV S  R    TS ++  +    
Sbjct: 74  PALATEW--KLIDSKHWRFTLRKGVKFHDGADFTADDVVASMNRVSDPTSPLRGNIPLYV 131

Query: 128 EVRAVDDMTVEFVTEGPNPILPNNFTNLFIMDKGWTEANGVTRVQDIANGETTFAATNAM 187
            V+ VDD TV+     P+ +  N+ +N+F+    W + N   +  DIA+    +A  N  
Sbjct: 132 GVKKVDDFTVDIEVSAPSALFLNDMSNIFMFSAKWLKDNNAEKPTDIASNTENYATHNTN 191

Query: 188 GTGPYVLTSREPDVRTVLTINPDYWGADDFPLQVTEIIYTPIQNAATRVAALLSGEVDFI 247
           GTGP+ L SR PD +TVL +N  +W  D     +  I Y PI +AATRVAALLS E+D +
Sbjct: 192 GTGPFKLESRVPDSKTVLLVNDQWW--DQKKHNLDRIEYIPISSAATRVAALLSSEIDLL 249

Query: 248 QDVPVQDLERVAGTDGLEVQTAAQNRVIFLGMNSGADDLDSDNVEGANPLADARVRKAMN 307
              P+QDL R+  + G+ V    + R +F+G N G + L+       NP  D RVR+A+ 
Sbjct: 250 DSAPIQDLPRLESSPGITVSKRTELRTVFIGFN-GKEKLEDGR---PNPFLDLRVRQAVE 305

Query: 308 MAINRDAIKQVVMRGQSAPAGMIAPPFVNGWTAEMDGAAMTDIDAAKALMEEAGYGDGFS 367
            +I+RD I + +MRG + P+G +  P + G+   +D     D   A+ L+E+AG  D  +
Sbjct: 306 ASIDRDLINKKIMRGLARPSGSLIAPEIAGYAKSLDTYQPADSKLAQKLLEDAGQKD-LA 364

Query: 368 IQLDCPNDRYINDEAICQAVVGMLGQIGVTVNLDAKPKAQHFPLIQNGETNFYMLGW-GV 426
               C ND  IN+E IC  +  ML + G    +D  P+A   P   NG+ + + L W   
Sbjct: 365 FTYLCMNDESINEEDICSGIANMLKRAGFQPTIDMGPRAVQQPKRTNGKADMFNLSWANE 424

Query: 427 PTYDSEYVFNFLVHTREGDRGSWNNTGFSNAEVDAKIVSLASETDLAVRNQTIAEIWQVV 486
           PT D+  + + ++ TR G  G  N  G+S  E+D  +   A E D A R     +  ++ 
Sbjct: 425 PTLDAYSLLSQVLSTRSGSTGVSNYGGWSYPELDDLVKKAAQEPDTAKRLALEEQALKIA 484

Query: 487 QDEQLYLPIHHQVLNWGNTSAVGYPNVSPEDDPK 520
           +D+ + +P+H Q + WG    V   +   ++ P+
Sbjct: 485 KDKAILIPLHQQPIAWGMLDKVKSVDFRADNKPR 518