Pairwise Alignments

Query, 592 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 596 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

 Score =  529 bits (1363), Expect = e-154
 Identities = 274/593 (46%), Positives = 374/593 (63%), Gaps = 5/593 (0%)

Query: 4   YTAPTKDMQFLLHDVLQVSQNDIPGYDELDRDFTGAVLDEAGKLAMEVLHPLNTVGDQQG 63
           Y AP +DM+F+LH++   + +     + LDR+    VL+EA +     + PLN   D++G
Sbjct: 3   YKAPLRDMRFVLHELFDATAHCELLGNGLDRELIDGVLEEAARYTGGEIAPLNRNSDEEG 62

Query: 64  CVLENGVVRTPEGFKDAYKIMCDGGWTGLDMDPEYGGQGMPYILQTATGEMFSAANMAFQ 123
             LENG VRTP+GF +AY+   D GW  +    EYGGQG P ++     EM   A+++F+
Sbjct: 63  VTLENGEVRTPQGFVEAYRQYVDNGWASMTGPTEYGGQGFPQLVACNFHEMLMGASLSFR 122

Query: 124 MYNGLTHGAMSALAEHGSDQQKATYLPKMIAGNWTGTMNLTEPQCGTDLGLIRTKAEPQE 183
           +Y+GLT GA+ AL +HGSD+ K  YL K+++G+W+GTM LTEPQ GTDL L+RT+AEPQ 
Sbjct: 123 IYSGLTEGAVLALYKHGSDELKNAYLEKLVSGSWSGTMCLTEPQAGTDLALLRTRAEPQA 182

Query: 184 DGSYAITGQKIWISAGEHDMSENIIHLVLAKIPGGPEGVKGISLFIVPKFLVNDDGSLGA 243
           DGSY ++G KI+IS GEHDMSENI+HLVLA++P  P GVKGISL +VPKF+ N DG+LG 
Sbjct: 183 DGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGVKGISLLLVPKFIANADGTLGE 242

Query: 244 RNAVSCGGLEHKMGIHGNATCVMNYDGATGFLVGEMHKGLRAMFTMMNEARLSVALQGYA 303
           RNA+SCG +EHKMGI G ATCVMN+DGATG++VG  ++GL  MFTMMN+AR  V LQG  
Sbjct: 243 RNALSCGAVEHKMGIKGAATCVMNFDGATGWVVGAPNQGLACMFTMMNDARFQVGLQGLG 302

Query: 304 QGDIAYQNALGFARDRLQGRDITGAQAPNKPADPIIVHPDVRRNLMDQKSFVEGARALVF 363
             + AYQ +L +AR+RLQ R + G Q P+KPADPIIVHPDVRR L+ QK+ VEG+R L  
Sbjct: 303 IAEQAYQGSLAYARERLQSRGLAGVQHPDKPADPIIVHPDVRRMLLTQKTLVEGSRMLAA 362

Query: 364 WGATLIDQAHRCKDAE----ADAMISLLIPVMKGFLTDKGFETTVLAQQTLGGSGFTREW 419
           + A  +D  H   +      A    +LLIP++K F TD G E   L  Q  GG G+ REW
Sbjct: 363 YCARQLDLEHGHPEPSHRKAASTRAALLIPIVKAFFTDMGQEVASLGVQVYGGHGYIREW 422

Query: 420 GLEQFVRDARIAMIYEGTNGIQSLDLVGRKLGLNGGKTVMAFFDMVKTFLKENEDNAELK 479
           G+EQ +RD+RI  +YEGTNGIQ+LD + RKL  +GG  + A             D   L 
Sbjct: 423 GMEQLMRDSRITQLYEGTNGIQALDYIRRKLLGDGGAELSALQAEFSEICDRQIDRPALH 482

Query: 480 SGFLDPLKAASKDLQAAGMYFMSDGMKNPNNALSGSYDFMHLFGHVCLGLMWARMAKASI 539
                 ++A   + +      ++   ++P    + S DF+    +V L  +W + A  + 
Sbjct: 483 D-MASKVQARIGEWRELTAEIIAATGRDPQEIGAVSVDFLQYSAYVLLAGLWLQAAGRAQ 541

Query: 540 AALEAGDTDTDFHATKIATGRYYMSRQLPMTGTHLARIMSGAEPVMALDAANF 592
            ALE G  +  F+  K+A+  +Y+ R LP    H   I  GA  +MAL  ++F
Sbjct: 542 DALEQGSAEEAFYQAKLASADFYLRRVLPRASAHREAIQGGAACLMALPESDF 594