Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 546 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (642), Expect = 4e-71
 Identities = 178/498 (35%), Positives = 246/498 (49%), Gaps = 12/498 (2%)

Query: 45  RFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVEAHFGVPACGAVLNTINIRL 104
           R TYA+  +R  RLA AL   G APGD + TL  N    +E ++GVP  G V +TIN RL
Sbjct: 40  RQTYADTASRARRLARALIELGAAPGDAIGTLAWNGNRHLELYYGVPGAGMVCHTINPRL 99

Query: 105 DVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDGPAPLLIEVADDAAGVHALGGYT-- 162
             + +A+I+   G + + VD  FL L A     L  PA   + V DD A    L G    
Sbjct: 100 FAEQIAFIIKDAGDRFLFVDPGFLGLLAGILPDL--PALEAVVVMDDHAPAAELAGVRLL 157

Query: 163 EYEDFLAGGDPD-FPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWR 221
            YE+ LA    D F W    DE  +  + YTSGTTG PKGVVY HR   L  +  V    
Sbjct: 158 AYEEVLAAQTDDAFDW-PSFDENAAAGICYTSGTTGNPKGVVYSHRSTILHALSAVQPDV 216

Query: 222 MVLYPR--WLAIVPLFHCNGWNHSWMMPMLGGTVVCCRD-VSAQAIYTAIAENGVTHFGG 278
             L  R   + +VP+FH N W      PM+G  +V     +   ++   I    VT   G
Sbjct: 217 FALSARDTVMPVVPMFHVNAWGMPHAAPMVGAKLVLPGGRLDGASLIELIRGEQVTATAG 276

Query: 279 APIVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLAAIEELGFNVTQVYGLTETYGHV 338
            P V   ++   +A     +    V   GA    + ++    LG      +G+TET    
Sbjct: 277 VPTVWQGLLGHVEAKGGGLAPLDRVVIGGAACPQSMMSRFAALGTRAIHAWGMTETSPLC 336

Query: 339 TECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEMRQVPMDGATTGEVMMRGNS 398
              V       L + E   ++ +QG      E + ++D   R +P DG T G + +RG  
Sbjct: 337 VASVLTARHRDLGEDEALRLRLKQGRPAFGAE-LRIVDHAGRALPWDGVTRGMLEVRGPW 395

Query: 399 VMKGYYRNPDATAEAFAGGYFHSGDIALQHPDGYIQIADRAKDIIISGGENISSVEVEGA 458
           +  GY  NPD TA + A G+F +GD+A    DG++ I DR KD+I SGGE ISS+ +E  
Sbjct: 396 ICAGYLNNPDRTAFS-ADGWFATGDVATITTDGFMDIVDRTKDVIKSGGEWISSIALENI 454

Query: 459 LMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDGKTAEEAEIIAFARERLAGFKTPKKVVF 518
            + HPAV   A +A+PD  WGE P   V L++G T    E+ A+   ++A +  P  +V 
Sbjct: 455 AIGHPAVREVAAIARPDARWGERPRLIVALREGATLTPGEMAAWFEGKVAKWWIPDDLVI 514

Query: 519 TE-LPKTSTGKIQKFELR 535
            E LP T+TGK+QK ELR
Sbjct: 515 VETLPHTATGKLQKRELR 532