Pairwise Alignments

Query, 463 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 475 a.a., two-component response regulator NtrC from Marinobacter adhaerens HP15

 Score =  278 bits (711), Expect = 3e-79
 Identities = 169/461 (36%), Positives = 257/461 (55%), Gaps = 8/461 (1%)

Query: 1   MSAPP-ILLIEDTPSLQLVYDAIIRGAGHAVICADTADAGLTGFKTHKPRVVVLDLMLPD 59
           MS P  + +I+D  S++ V +  +  AG      D+ ++ +   +  +P  +V D+ +P 
Sbjct: 1   MSQPANVWIIDDDRSIRWVLERALNQAGMQPRVFDSGESIMMRLEHEQPDAIVSDIRMPG 60

Query: 60  RDGLELMRECLALNPDARFVVITANGSINRAVEAMRGGAYEFLVKPFDEGRFLAAIDNAL 119
            DG+ L+ + + ++PD   +++TA+  +  AV + + GA+E+L KPFD    +A +  A+
Sbjct: 61  VDGITLLSQIVDVHPDVPVIIMTAHSDLESAVTSYQTGAFEYLPKPFDVDDAVALVKRAV 120

Query: 120 -RDHVRPPEETPEVLNDFRG--FIGSSDTMQDVYRRIQSVSRSMATVFITGESGTGKEVC 176
              H +     P+     R    IG +  MQ+V+R I  +S S  TV I GESGTGKE+ 
Sbjct: 121 AHSHEKRASGEPQAEMAQRNAEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELV 180

Query: 177 AQAVHDSSTRAGKPFVPLNCGAIPSDLLESEVFGHLRGSFTGAIADKIGAAAAADGGTLF 236
           AQA+H+ S RA  PF+ LN  AIP DL+ESE+FGH +G+FTGA A + G    A+GGTLF
Sbjct: 181 AQALHNHSPRANHPFIALNMAAIPKDLIESELFGHEKGAFTGAGAARQGRFEQANGGTLF 240

Query: 237 LDEICEMDLNLQTKLLRFLQTSTIQPVGATRARKINVRIICATNRNPLEEVRRGRFREDL 296
           LDEI +M  + QT+LLR L       VG T   K++VRII AT+++  + V+ G FREDL
Sbjct: 241 LDEIGDMPADTQTRLLRVLADGEFYRVGGTTPIKVDVRIIAATHQDLEKLVQAGTFREDL 300

Query: 297 YYRLQVVPIHLPPLRERGEDVIAIARDAVRKFAAEEGRRFTGLAPEVEALFRTLPWPGNV 356
           ++RL V+ +HLP L ER ED+  + +  +++ A E       L  E E    TLPWPGNV
Sbjct: 301 FHRLNVIRVHLPKLAERREDIPRLMQHFLKRAAKELAVEPKILREEAEEYLTTLPWPGNV 360

Query: 357 RQVINVMRNVVVLNDGPLVTQTMLPLEILHHHEAMTNNA----GPVGLPPEKPVVSLDGL 412
           RQ+ N  R + V+  G  +    LP E+LH  E  T       G      ++      G+
Sbjct: 361 RQLENTCRWLTVMASGREIHIDDLPPELLHQAETPTTGTTWQEGLKNWAEQELKRGKKGI 420

Query: 413 MGRTMAEIERMVIEETIARHGGSVPKAARVLDLSPSTIYRK 453
           +   + E E+++IE  +   GG    A+ +L    +T+ RK
Sbjct: 421 LDTAVPEFEKIMIETALKHTGGRRRDASILLGWGRNTLTRK 461