Pairwise Alignments

Query, 463 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 467 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

 Score =  283 bits (724), Expect = 9e-81
 Identities = 154/389 (39%), Positives = 229/389 (58%), Gaps = 13/389 (3%)

Query: 4   PPILLIEDTPSLQLVYDAIIRGAGHAVICADTADAGLTGFKTHKPRVVVLDLMLPDRDGL 63
           P IL++ED   ++     ++  AG+ V  A + +      +  +  +++ DL LP   G 
Sbjct: 2   PRILIVEDEDIIRSAVRKLLLHAGYEVADAASVEEAEQNHEPDQFDLIISDLRLPGAAGT 61

Query: 64  ELMRECLALNPDARFVVITANGSINRAVEAMRGGAYEFLVKPFDEGRFLAAIDNALR--- 120
           EL+       P+   +++T+  S+  AV++M+ GA E++ KPFD    LAA++N L    
Sbjct: 62  ELINRA----PNTPVLIMTSYASLRSAVDSMKMGAVEYIAKPFDHDEMLAAVENILARKP 117

Query: 121 ------DHVRPPEETPEVLNDFRGFIGSSDTMQDVYRRIQSVSRSMATVFITGESGTGKE 174
                 D   P  ETPE  +      G  + MQ V+  I+ V+ +  TV I GESGTGKE
Sbjct: 118 AGRNSGDDSAPALETPESSDPANIMFGQCEPMQRVFTLIRKVAPTETTVLIQGESGTGKE 177

Query: 175 VCAQAVHDSSTRAGKPFVPLNCGAIPSDLLESEVFGHLRGSFTGAIADKIGAAAAADGGT 234
           + A+A+H  S RA KP + +NC AIP  L+ESE+FGH +G+FTGA++ + G   AADGG+
Sbjct: 178 LAARALHLLSPRAAKPLISVNCAAIPESLIESELFGHEKGAFTGAVSARTGLIEAADGGS 237

Query: 235 LFLDEICEMDLNLQTKLLRFLQTSTIQPVGATRARKINVRIICATNRNPLEEVRRGRFRE 294
           LFLDEI E+    Q +LLR LQ S I+ VG+T++R +NVR+I AT+RN     R G FRE
Sbjct: 238 LFLDEIGELPAEAQARLLRVLQESEIRKVGSTQSRTVNVRMIAATHRNLKAMTRTGEFRE 297

Query: 295 DLYYRLQVVPIHLPPLRERGEDVIAIARDAVRKFAAEEGRRFTGLAPEVEALFRTLPWPG 354
           DLYYRL V+ I +PPLRER  D++ +AR  +++     G+    L+PE         WPG
Sbjct: 298 DLYYRLNVMQIRIPPLRERQSDILGLARRFLKRQGERMGKPDLNLSPEAMRALERHRWPG 357

Query: 355 NVRQVINVMRNVVVLNDGPLVTQTMLPLE 383
           NVR++ N +    +L DG ++T ++L L+
Sbjct: 358 NVRELENAIERATILCDGDVITPSLLDLD 386