Pairwise Alignments

Query, 463 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 469 a.a., nitrogen regulation protein NR(I) from Pantoea sp. MT58

 Score =  280 bits (717), Expect = 6e-80
 Identities = 176/470 (37%), Positives = 254/470 (54%), Gaps = 35/470 (7%)

Query: 6   ILLIEDTPSLQLVYDAIIRGAGHAVICADTADAGLTGFKTHKPRVVVLDLMLPDRDGLEL 65
           + +++D  S++ V +  + GAG +    D+A   L    T  P V++ D+ +P  DGL L
Sbjct: 6   VWIVDDDSSIRWVLERALTGAGLSCATFDSASEVLDALSTKTPDVLLSDIRMPGMDGLAL 65

Query: 66  MRECLALNPDARFVVITANGSINRAVEAMRGGAYEFLVKPFDEGRFLAAIDNALRDHV-- 123
           +++    +P    +++TA+  ++ AV A + GA+++L KPFD    +A ++ A+  +   
Sbjct: 66  LKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQ 125

Query: 124 RPPEETPEVLNDFRGFIGSSDTMQDVYRRIQSVSRSMATVFITGESGTGKEVCAQAVHDS 183
           + P   P V       IG +  MQDV+R I  +SRS  +V I GESGTGKE+ A A+H  
Sbjct: 126 QQPRNQP-VSGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRH 184

Query: 184 STRAGKPFVPLNCGAIPSDLLESEVFGHLRGSFTGAIADKIGAAAAADGGTLFLDEICEM 243
           S R   PF+ LN  AIP DL+ESE+FGH +G+FTGA   + G    ADGGTLFLDEI +M
Sbjct: 185 SPRTKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADGGTLFLDEIGDM 244

Query: 244 DLNLQTKLLRFLQTSTIQPVGATRARKINVRIICATNRNPLEEVRRGRFREDLYYRLQVV 303
            L++QT+LLR L       VG     K++VRII AT++N    V+ G+FREDL++RL V+
Sbjct: 245 PLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVI 304

Query: 304 PIHLPPLRERGEDVIAIARDAVRKFAAEEGRRFTGLAPEVEALFRTLPWPGNVRQVINVM 363
            +HLPPLRER ED+  +AR  ++  A E G     L PE E     L W GNVRQ+ N  
Sbjct: 305 RVHLPPLRERREDIPRLARYFLQVAARELGVEAKILHPETETALTRLHWSGNVRQLENTC 364

Query: 364 RNVVVLNDGPLVTQTMLPLEILHHHEAMTNNAGPVGLPPEKPVVSL-------------- 409
           R + V+  G  V    LP E+    E+ T         PE PV SL              
Sbjct: 365 RWLTVMAAGQEVLIQDLPSELF---ESST---------PENPVQSLPDSWATLLAQWADR 412

Query: 410 ------DGLMGRTMAEIERMVIEETIARHGGSVPKAARVLDLSPSTIYRK 453
                   L+     E+ER ++   +    G   +AAR+L    +T+ RK
Sbjct: 413 ALRSGHQNLLSEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRK 462