Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 364 a.a., ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 19/250 (7%)

Query: 48  KVNAAGEGVVQIEVRGGPEAIGMFQQPDAVRDGIVDMVYTPGSFYGGTVPEK--DAMVAS 105
           +V AA +   QI      E +   Q  DAV++G ++   +   FY G  P    D  +  
Sbjct: 57  RVAAATDNKFQIRTFAAGEIVPALQVLDAVQNGTIECGQSAAYFYIGKDPTFCFDTAMPF 116

Query: 106 NLTAVE----ARENGGTDLMNQIHQEKMGVYYLGWFDSGVSYNLWTKDEPQFEENGDLSV 161
            L   +        GG +LM ++ +E   +Y +   ++      W + E +  E  DLS 
Sbjct: 117 GLNTRQHISWMMHGGGLELMRELFREH-NIYNIPAGNTTAQMGGWFRKEIKTVE--DLS- 172

Query: 162 EGIKLRGNAVYNAFFTEYLGAQVIDLPTTDVYAALERGVVDATGWTQIGLID---LKWNE 218
            G+K+R   +      + LG     +   D+Y ALERG +DA  +  +G  D   L +++
Sbjct: 173 -GLKMRVGGLAGQIMGK-LGLVPQQIGGGDIYPALERGTIDAAEF--VGPYDDEKLGFHK 228

Query: 219 FLNYRIEPNFF--STDLGVIVNLEKWESLSDEAKTILQDVAIQHERDSVEALRAKRDADF 276
              Y   P ++  S  + +++N+  WE L +  KTIL+    +     +    A   A  
Sbjct: 229 VAKYYYSPGWWEGSAQIPLMINITAWEQLPESYKTILEQACWEANTWMIAKYDAVNAAAL 288

Query: 277 AALEEGGMQV 286
             L  GG Q+
Sbjct: 289 KRLVAGGAQL 298