Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 73/352 (20%), Positives = 144/352 (40%), Gaps = 41/352 (11%)

Query: 2   KHYVLSGALAAGLGLGGAAQATETLTAVHAFPTTLIYTQSFLEFVDKVNAAGEGVVQIEV 61
           K  +L  AL     + G AQA   +      P       +      K+    +G +  ++
Sbjct: 4   KRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKM 63

Query: 62  RGGPEAIGMFQQPDAVRDGIVDMVYTPGSFYGGTVPEKDAM--------VASNLTAVEAR 113
             G       +  + V+ G V M        G  VP+ +           A   T ++ +
Sbjct: 64  YAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQ 123

Query: 114 ENGGTDLMNQIHQEKMGVYYLGWFDSGVSYNLWTKDEPQFEENGDLSVEGIKLRGNAVYN 173
              G +++++I   +  +  L W D G + NL+TK      +  DL    I+++GN V+ 
Sbjct: 124 I--GQEILDKITNSEFNMVALAWMDGG-TRNLYTK--KPVRQISDLKGMKIRVQGNPVFI 178

Query: 174 AFFTEYLGAQVIDLPTTDVYAALERGVVDA------TGWTQIGLIDLKWNEFLNYRIEPN 227
               + +G   I + T ++++AL+ GV+D       T +      + K+     + I P 
Sbjct: 179 ETIND-MGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPE 237

Query: 228 FFSTDLGVIVNLEKWESLSDEAKTILQDVAIQHERDSVEALRAKRDADF-AALEEGGMQV 286
                  ++++   WE L+ E + +++ +A + + +    L  K  AD    L+  G++ 
Sbjct: 238 ------PIVMSKTTWEKLNPEQQALVKKLAREAQMEE-RVLWDKSSADAETKLKAAGVEF 290

Query: 287 VSLEGEAKERYLAA---AREKTWERMRGLMAEHPSGDGNYDTLISLYYDPAL 335
           ++L  E K+ +  A    R+K   + +GL+          D + ++  DPAL
Sbjct: 291 ITLTPEQKKAFYDATQPVRDKYGAKYKGLI----------DRIGAVQTDPAL 332