Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 339 a.a., TRAP transporter substrate-binding protein DctP from Rhodopseudomonas palustris CGA009

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 76/325 (23%), Positives = 133/325 (40%), Gaps = 28/325 (8%)

Query: 2   KHYVLSGALAAGLGLG---GAAQATETLTAVHAFPTTLIYTQSFLE-----FVDKVNAAG 53
           + ++L  ALAA   L    G+AQA  TL   H FP   I    F +     F D+++   
Sbjct: 4   RRHLLISALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKGDFRDRLCRKFADEISKRS 63

Query: 54  EGVVQIEVRGGPEAIGMFQQPDAVRDGIVDMVYTPGSFYGGTVPEKDAMVASNLTAVEAR 113
            G +  EV  G   I    Q  A+R G +D+   P  + GG VPE +  +   L  V   
Sbjct: 64  GGELVGEVYPGSSLIKTNAQFSAMRKGALDLSLYPMPYAGGEVPETNIGLMPGL--VSTY 121

Query: 114 ENG--------GTDLMNQIHQEKMGVYYLGWFDSGVSYNLWTKDEPQFEENGDLSVEGIK 165
           E G        G  L + +  + + +    W   GV+        P          +G+K
Sbjct: 122 EQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASRSKALLSPD-------DAKGLK 174

Query: 166 LRGNAVYNAFFTEYLGAQVIDLPTTDVYAALERGVVDATGWTQIGLIDLKWNE---FLNY 222
           +RG +       +  GA V+ +P+ ++YAA++ G  DA   +   LI  +  E    L  
Sbjct: 175 VRGGSREMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLISFRLEEVAKHLTS 234

Query: 223 RIEPNFFSTDLGVIVNLEKWESLSDEAKTILQDVAIQHERDSVEALRAKRDADFAALEEG 282
             + +++     ++++   ++ L    + I+  V  + E    +  +A         E+ 
Sbjct: 235 GADASYWFMLEPLMMSKAIFDKLPKNHQDIILSVGAELEAFGKQGAQADDIEVAKVYEKA 294

Query: 283 GMQVVSLEGEAKERYLAAAREKTWE 307
           G +V  L+    E++   AR+  W+
Sbjct: 295 GAKVDKLDAATVEKWAVIARDTAWK 319