Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 363 a.a., TRAP transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 76/318 (23%), Positives = 125/318 (39%), Gaps = 24/318 (7%)

Query: 1   MKHYVLSGALAAGLGLGGAAQATETLT--AVHAFPTTLIYTQSFLEFVDK-VNAAGEGVV 57
           +K      A AA +     AQ++  +      +FP +L       E++ K V    +   
Sbjct: 7   LKVSATGAAAAAAVASPAIAQSSPEVKWRLTSSFPKSLDTIYGGAEYLAKQVAEMTDNKF 66

Query: 58  QIEVRGGPEAIGMFQQPDAVRDGIVDMVYTPGSFYGGTVPEKDAMVASNLTAVEAR---- 113
           QI+V    E +   Q  DA  +G V+M +T   +Y G  P   A+ AS    + AR    
Sbjct: 67  QIQVFAAGEVVPGLQALDATSNGTVEMCHTVSYYYVGKDP-TFAVFASVPFGLNARQQNS 125

Query: 114 ---ENGGTDLMNQIHQEKMGVYYLGWFDSGVSYNLWTKDEPQFEENGDLSVEGIKLRGNA 170
              + GG +L N+ + +K G+      ++      W + E   +   D+S  G+K+R   
Sbjct: 126 WLYQGGGNELANEFY-KKYGLVGFPCGNTCTQMGGWFRKE--IKTVADMS--GLKMRIGG 180

Query: 171 VYNAFFTEYLGAQVIDLPTTDVYAALERGVVDATGWTQIGLID---LKWNEFLNYRIEPN 227
           +      + +G     +   D+Y ALE+G +DA  W  +G  D   L + +   Y   P 
Sbjct: 181 IAGQVL-QKVGVVPQQIAGGDIYPALEKGTIDAAEW--VGPYDDEKLGFQKVAKYYYYPG 237

Query: 228 FF--STDLGVIVNLEKWESLSDEAKTILQDVAIQHERDSVEALRAKRDADFAALEEGGMQ 285
           F+     +    NLEK+  L    + IL + A+                    L  GG Q
Sbjct: 238 FWEGGPTVHAFTNLEKFNQLPKNYQAILANAAVNTNTWMNARYDMLNPTALKRLVAGGTQ 297

Query: 286 VVSLEGEAKERYLAAARE 303
           +     E  +  L A  E
Sbjct: 298 LRPFSNEILDACLKATNE 315