Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 377 a.a., ABC transporter substrate-binding protein from Cupriavidus basilensis FW507-4G11

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 73/308 (23%), Positives = 123/308 (39%), Gaps = 28/308 (9%)

Query: 31  AFPTTLIYTQSFLEFVD-KVNAAGEGVVQIEVRGGPEAIGMFQQPDAVRDGIVDMVYTPG 89
           +FP +L       E +  +V    +G   I+V    E +   Q  D+V++  V + +T G
Sbjct: 55  SFPKSLDTIYGGAELLSQRVKELTDGKFNIKVFAAGELVPGLQVLDSVQNNTVQIGHTAG 114

Query: 90  SFYGGTVPEK--DAMVASNLTAVEAR----ENGGTDLMNQIHQEKMGVYYLGWFDSGVSY 143
            +Y G  P    D  V   LT+ +      +  G  LM +  +E   V +LG  ++    
Sbjct: 115 YYYFGKNPTLCFDTTVPFGLTSRQQNAWMMQGNGMKLMREFFKEYNVVNFLGG-NTNAQM 173

Query: 144 NLWTKDEPQFEENGDLSVEGIKLRGNAVYNAFFTEYLGAQVIDLPTTDVYAALERGVVDA 203
             W + E   +   DL  +G+K R  A +       LG     +   D+Y ALE+G +DA
Sbjct: 174 GGWFRKE--IKTVADL--QGLKYR-IAGFAGVVLSRLGVVPQQIAGGDIYPALEKGTIDA 228

Query: 204 TGWTQIGLIDLKWNEFLNYRIEPNFF-------STDLGVIVNLEKWESLSDEAKTILQDV 256
             W  +G  D +   F  Y++ P ++       S  L    +  ++E L    K  L+  
Sbjct: 229 AEW--VGPYDDEKLGF--YKVAPYYYYPGWWEGSAQLSFYSSATEYEKLPALYKRALETA 284

Query: 257 AIQHERDSVEALRAKRDADFAALEEGGMQVVSLEGEAKERYLAAAREKTWERMRGLMAEH 316
            I+   + +           A L E G+++     E  E    A ++   E      A++
Sbjct: 285 TIEVHTNMMAKYDTVNPQALARLLENGVKLRPFSKEIMEACFKATQDAYAEE----TAKN 340

Query: 317 PSGDGNYD 324
           PS    YD
Sbjct: 341 PSFKKIYD 348