Pairwise Alignments

Query, 871 a.a., ATPase AAA-2 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas stutzeri RCH2

 Score =  979 bits (2531), Expect = 0.0
 Identities = 497/844 (58%), Positives = 646/844 (76%), Gaps = 4/844 (0%)

Query: 1   MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV 60
           M +++ T + +  L  AQ+IA+  +H  + P HL++ALL+ + G    L+ + G D A +
Sbjct: 1   MRIDRLTSKLQLALSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIAAL 60

Query: 61  REALAAALDKLPKVSGDGAQTYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAVTKS 120
           R+AL   LD+LPK+        L Q  A++L++A++LA + GD ++  E +L A   + +
Sbjct: 61  RQALTKELDQLPKLQNPTGDMNLSQDLARLLNQADRLAQQKGDQYISSELVLLAALDSNT 120

Query: 121 GAKTALEAGGVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADGKIDPI 180
                L A GVS +AL  AIN++R G   +  +AE    AL K+  D+T+ A DGK+DP+
Sbjct: 121 RLGKLLLAQGVSKKALENAINNLRGGDAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPV 180

Query: 181 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLMAL 240
           IGRD+EIRR +QVL RRTKNNPVLIGEPGVGKTAI EGLA RI+NG+VP+ L++K+L+AL
Sbjct: 181 IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLAL 240

Query: 241 DMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDASNLLK 300
           DMGSLIAGAK+RGEFEERLK+VL++++   G +ILFIDE+HT+VGAGKA+GAMDA N+LK
Sbjct: 241 DMGSLIAGAKFRGEFEERLKAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKYELH 360
           PALARGELHCVGATTLDEYR+Y+EKDAAL RRFQ V+V EP+ EDT++ILRG+KE+YE+H
Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH 360

Query: 361 HGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDREIL 420
           HGV I+D A++AAA LSHRYITDR LPDKAIDL+DEAASR+RME+DSKPEELD LDR ++
Sbjct: 361 HGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLI 420

Query: 421 QKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDLKEHLD 480
           Q +IE EAL+ EDD A+++RLA LE D++ L +  A++   W+SE+ ++  +  +++ ++
Sbjct: 421 QLKIEREALKKEDDEATKKRLAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQQKIE 480

Query: 481 KARAELEIAKREGNLARAGELSYGVIPGLEK--QLAEAESGEGDVMVEEAVRPEQIASVV 538
           +A+AELE A+R+G+LAR  EL YG+IP LE+  ++ +    + + ++   V  E+IA VV
Sbjct: 481 QAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQHGKKENQLLRNKVTDEEIAEVV 540

Query: 539 ERWTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDENRPLGS 598
            +WTGIP SKMLEGER+KLLRME+ +  RVIGQ  AV AV+NAVRR+RAGL D NRP GS
Sbjct: 541 SKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGS 600

Query: 599 FLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGG 658
           FLFLGPTGVGKTEL KA+AEFLFD + AM+RIDMSEFMEKH+VARLIGAPPGYVGY+EGG
Sbjct: 601 FLFLGPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG 660

Query: 659 VLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNL 718
            LTEAVRR+PY VVL DEVEKAHPDVFNVLLQVL+DG LTD  GRTVDFK T+IV+TSNL
Sbjct: 661 YLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNL 720

Query: 719 GAQALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAIVDIQLA 778
           G+  + +L    D  A +  VMDAV  HFRPEF+NR+DE ++FD L R+ +  I DIQL 
Sbjct: 721 GSTQIQELV--GDPGAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLG 778

Query: 779 RLQKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDVTD 838
           RL+KRL  R+L+L L   A   L   GYDPV+GARPLKR IQR +++ LA+ IL+G    
Sbjct: 779 RLRKRLAERELSLELSQEAMDKLIAVGYDPVYGARPLKRAIQRWIENPLAQQILSGQFAP 838

Query: 839 GETI 842
           G ++
Sbjct: 839 GSSV 842