Pairwise Alignments

Query, 871 a.a., ATPase AAA-2 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 899 a.a., chaperone protein ClpB from Phaeobacter inhibens DSM 17395

 Score = 1421 bits (3679), Expect = 0.0
 Identities = 722/872 (82%), Positives = 805/872 (92%), Gaps = 1/872 (0%)

Query: 1   MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV 60
           M++ KFTER+RGF+QAAQTIA RE+HQR++PEHLLKAL+DD++GLA+NLI RAGG   +V
Sbjct: 28  MDLNKFTERARGFVQAAQTIARREDHQRLMPEHLLKALMDDDQGLASNLITRAGGTPEQV 87

Query: 61  REALAAALDKLPKVSGDGAQTYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAVTKS 120
            +AL  A+ KLP+V G+ A  YLD QTAKVLDEA K+A KAGDSFVPVER+L AL + KS
Sbjct: 88  VQALELAVSKLPRVQGNSADIYLDGQTAKVLDEAAKIAEKAGDSFVPVERLLMALCMVKS 147

Query: 121 GAKTALEAGGVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADGKIDPI 180
            AK AL  G VSAQALN A+NDIRKGR AD+ASAE GYDALKK+ARDLTEA  DGKIDPI
Sbjct: 148 KAKDALADGNVSAQALNEAVNDIRKGRKADSASAEDGYDALKKYARDLTEAVRDGKIDPI 207

Query: 181 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLMAL 240
           IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEG+ALRI+NGDVPESLR+K+L++L
Sbjct: 208 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLRDKQLLSL 267

Query: 241 DMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDASNLLK 300
           DMG+LIAGAKYRGEFEERLK+VL+EVT AAGEIILFIDEMHTLVGAGK+DGAMDA+NL+K
Sbjct: 268 DMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLIK 327

Query: 301 PALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKYELH 360
           PALARGELHC+GATTLDEYRKYVEKDAALARRFQPVMV EPTVEDT+SILRGIKEKYELH
Sbjct: 328 PALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYELH 387

Query: 361 HGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDREIL 420
           HGVRI+D+ALV+AATLSHRYITDRFLPDKAIDL+DEAA+RLRM+VDSKPEELDALDR+IL
Sbjct: 388 HGVRIADAALVSAATLSHRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDALDRQIL 447

Query: 421 QKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDLKEHLD 480
           Q QIE EAL+LEDDAAS++RL +L+K+L++LQ++SAEMTAQWQSERDKLASAR LKE LD
Sbjct: 448 QMQIEEEALKLEDDAASKDRLETLQKELAELQEKSAEMTAQWQSERDKLASARGLKEQLD 507

Query: 481 KARAELEIAKREGNLARAGELSYGVIPGLEKQLAEAESGE-GDVMVEEAVRPEQIASVVE 539
           +ARA+L+ AKREGNLARAGELSYGVIPGLEKQL+EAE+ E   +MVEEAVRPEQIA VVE
Sbjct: 508 RARADLDAAKREGNLARAGELSYGVIPGLEKQLSEAEASERNGLMVEEAVRPEQIAGVVE 567

Query: 540 RWTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDENRPLGSF 599
           RWTGIPTSKMLEGEREKLLRME ++  RVIGQ  AV AV+NAVRRARAGLNDENRPLGSF
Sbjct: 568 RWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAVTAVSNAVRRARAGLNDENRPLGSF 627

Query: 600 LFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGGV 659
           LFLGPTGVGKTELTKAVA+FLFDDDSAMVR+DMSEFMEKHAVARLIGAPPGYVGYDEGGV
Sbjct: 628 LFLGPTGVGKTELTKAVADFLFDDDSAMVRVDMSEFMEKHAVARLIGAPPGYVGYDEGGV 687

Query: 660 LTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLG 719
           LTEAVRR+PYQV+LFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLI+LTSNLG
Sbjct: 688 LTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIILTSNLG 747

Query: 720 AQALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAIVDIQLAR 779
           AQALSQLPDGADA+ AKRDVMDAVRAHFRPEFLNRLDETIIFDRL R DMD IV +QLAR
Sbjct: 748 AQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRKDMDGIVTLQLAR 807

Query: 780 LQKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDVTDG 839
           L+KRL  RK+TL LDD A++WLADEGYDPVFGARPLKRVIQR LQ+ LAEM+LAG++ DG
Sbjct: 808 LEKRLVGRKITLELDDGAKTWLADEGYDPVFGARPLKRVIQRVLQNPLAEMLLAGEIRDG 867

Query: 840 ETIPVSAGPDGLLVGDRVSTSRRVPPQDAVVH 871
           +T+PVSAG +GL++GDR+ TS R  P DAVVH
Sbjct: 868 DTVPVSAGAEGLIIGDRIGTSDRPRPDDAVVH 899