Pairwise Alignments

Query, 871 a.a., ATPase AAA-2 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 862 a.a., ATP-dependent chaperone ClpB (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  941 bits (2431), Expect = 0.0
 Identities = 486/859 (56%), Positives = 628/859 (73%), Gaps = 8/859 (0%)

Query: 1   MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV 60
           M++ KFTE+S+  +  AQ+ A+R  HQ++  EH   AL+  E+GL   L+ RAG      
Sbjct: 1   MDINKFTEKSQQAIAEAQSTAVRLGHQQVDVEHAALALVRQEQGLVPRLLERAGYKPDAF 60

Query: 61  REALAAALDKLPKVSGDGA---QTYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAV 117
             AL AAL K P VSG GA   Q Y+ Q+  + L  A+  A +  D +V VE ++ A   
Sbjct: 61  AGALEAALQKRPAVSGPGAAQGQIYVTQRLNQALVRAQDFAKRLKDEYVSVEHLICAFLE 120

Query: 118 TKSGAKTALEAG--GVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADG 175
                     A   G++   L   + D+R  +   + + E  Y+AL+K+ RDL E A  G
Sbjct: 121 EPPSTDMGRVAREFGLTQDKLLAVLEDVRGAQRVTSQNPEDTYEALQKYGRDLVEEARKG 180

Query: 176 KIDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNK 235
           K+DP+IGRD EIRR +++LSRRTKNNPVLIGE GVGKTAI EGLA RI+ GDVPE L+N+
Sbjct: 181 KLDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEGLKNR 240

Query: 236 KLMALDMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDA 295
            L ALDMG+LIAGAKYRGEFEERLK+VL EV  A G I++FIDE+HT+VGAGK DGAMDA
Sbjct: 241 SLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRIVMFIDELHTIVGAGKTDGAMDA 300

Query: 296 SNLLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKE 355
            NLLKP LARGELHC+GATTLDEYRKY+EKD AL RRFQPV+V EPTVEDT+SILRG++E
Sbjct: 301 GNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVVVDEPTVEDTISILRGLRE 360

Query: 356 KYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDAL 415
           ++E+HHGVRISDSA+V A TLSHRYITDR LPDKAIDL+DEAA+ +R E+DS P ELD +
Sbjct: 361 RFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPAELDEV 420

Query: 416 DREILQKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDL 475
           +R+++Q +IE EALR E DAASRERL  LE +L+DL+   A + AQW+ E+  + + R +
Sbjct: 421 NRKVMQLEIEREALRRETDAASRERLEKLENELADLRASQATLLAQWEREKGSIDAVRTI 480

Query: 476 KEHLDKARAELEIAKREGNLARAGELSYGVIPGLEKQLAEAESGEGD-VMVEEAVRPEQI 534
           KE +++ R  ++ A+R  +L RA EL Y  +  LE++LA AE G+ +  +++E VRP+ +
Sbjct: 481 KEEIERTRLAIDEAERNYDLNRAAELKYSKLLELERKLAAAERGDDENRLLKEEVRPDDV 540

Query: 535 ASVVERWTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDENR 594
           A +V RWTGIP +++LE EREKLLR+ + +  RV+GQ  AV AVA AV RARAGL+D  R
Sbjct: 541 AEIVARWTGIPVTRLLESEREKLLRLGDVLHERVVGQDEAVQAVAEAVLRARAGLSDPGR 600

Query: 595 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGY 654
           P+GSF+FLGPTGVGKTEL K +AE LFD +  +VRIDMSE+MEKHAVARLIGAPPGYVGY
Sbjct: 601 PIGSFIFLGPTGVGKTELCKTLAESLFDSEDNIVRIDMSEYMEKHAVARLIGAPPGYVGY 660

Query: 655 DEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVL 714
           DEGG LTEAVRR+PY VVLFDE+EKAH DVFNVLLQ+LDDG LTD  GRTVDFK T+I++
Sbjct: 661 DEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNVLLQILDDGRLTDSHGRTVDFKNTIIIM 720

Query: 715 TSNLG-AQALSQLPDGADASAAKRD-VMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAI 772
           TSN+G +  L  + D  +     RD VMD +R HFRPEFLNR+DE ++F  L+ + +  I
Sbjct: 721 TSNIGSSHLLDGITDEGEFRPGVRDRVMDEMRRHFRPEFLNRVDEIVMFRPLLPEQIGRI 780

Query: 773 VDIQLARLQKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMIL 832
           V++ L +L+ RL  RK+T+ L DAAR ++A+  YDPV+GARPL+R +Q  ++  LA  ++
Sbjct: 781 VELLLGKLRGRLAERKITVDLSDAARDFIAESAYDPVYGARPLRRYLQTNVETPLARRLI 840

Query: 833 AGDVTDGETIPVSAGPDGL 851
           AGD+ DG+ + +    D L
Sbjct: 841 AGDLKDGQHVTIGVRVDKL 859