Pairwise Alignments

Query, 871 a.a., ATPase AAA-2 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 861 a.a., ATP-dependent chaperone ClpB from Pantoea sp. MT58

 Score =  955 bits (2468), Expect = 0.0
 Identities = 486/851 (57%), Positives = 625/851 (73%), Gaps = 2/851 (0%)

Query: 1   MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV 60
           M +++ T + +  L  AQ++A+  ++Q + P HL+ ALL  E G  + L+  AG D    
Sbjct: 5   MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLKQEGGSVSPLLTSAGVDVTPF 64

Query: 61  REALAAALDKLPKVSGDGAQTYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAVTKS 120
           R  +  A+D+LP+V G            +VL+  +KLA K  D+F+  E  + A   ++ 
Sbjct: 65  RAQVEQAIDRLPQVEGSEGDVQPSSDLVRVLNLCDKLAQKRNDNFISSELFVLAALESRG 124

Query: 121 GAKTALEAGGVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADGKIDPI 180
                L+A G + + + GAI  +R G   +   AE    ALKK+  DLTE A  GK+DP+
Sbjct: 125 SLADLLKAAGATREKITGAIEQMRGGDNVNDQGAEDQRQALKKYTIDLTERAEKGKLDPV 184

Query: 181 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLMAL 240
           IGRDEEIRR +QVL RRTKNNPVLIGEPGVGKTAI EGLA RIING+VPE L+ ++++AL
Sbjct: 185 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 244

Query: 241 DMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDASNLLK 300
           DMG+L+AGAKYRGEFEERLK VLS+++   G +ILFIDE+HT+VGAGKADGAMDA N+LK
Sbjct: 245 DMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 304

Query: 301 PALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKYELH 360
           PALARGELHCVGATTLDEYR+Y+EKDAAL RRFQ V V EP VEDT++ILRG+KE+YELH
Sbjct: 305 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPGVEDTIAILRGLKERYELH 364

Query: 361 HGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDREIL 420
           H V+I+D A+VAAATLSHRYI DR LPDKAIDL+DEAAS +RM++DSKPE LD L+R I+
Sbjct: 365 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRII 424

Query: 421 QKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDLKEHLD 480
           Q ++E +AL+ E D AS +RL  LE +L+  ++  AE+  +W++E+  L+  +++K  L+
Sbjct: 425 QLKLEQQALKKEADDASIKRLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELE 484

Query: 481 KARAELEIAKREGNLARAGELSYGVIPGLEKQLAEAESGEGDVM--VEEAVRPEQIASVV 538
           +AR  LE A+R+G+LA+  EL YG IP LEKQLA A   EG  M  +   V   +IA V+
Sbjct: 485 QARLNLEQARRQGDLAQMSELQYGKIPALEKQLAAATQAEGKTMKLLRNRVTDVEIADVL 544

Query: 539 ERWTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDENRPLGS 598
            RWTGIP ++M+EGER+KLLRME+++  RVIGQ  AV AV+NA+RR+RAGL+D NRP+GS
Sbjct: 545 ARWTGIPVARMMEGERDKLLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGS 604

Query: 599 FLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGG 658
           FLFLGPTGVGKTEL K++A FLFD D AMVRIDMSEFMEKH+V+RL+GAPPGYVGY+EGG
Sbjct: 605 FLFLGPTGVGKTELCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 664

Query: 659 VLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNL 718
            LTEAVRRRPY V+L DEVEKAHPDVFN+LLQVLDDG LTDGQGRTVDF+ +++++TSNL
Sbjct: 665 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNL 724

Query: 719 GAQALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAIVDIQLA 778
           G+  + +          K  VM  V  HFRPEF+NR+DE ++F  L    + +I  IQL 
Sbjct: 725 GSDLIQERFGNLSYPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQ 784

Query: 779 RLQKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDVTD 838
           RL KRLD R   L + D A   LA+ GYDPV+GARPLKR IQ+ +++ LA+ ILAG +  
Sbjct: 785 RLYKRLDERGYQLHISDDAIKLLAENGYDPVYGARPLKRAIQQQIENPLAQQILAGSLVP 844

Query: 839 GETIPVSAGPD 849
           G+TI +    D
Sbjct: 845 GKTIEMDVVND 855