Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 651 a.a., High-affinity choline uptake protein BetT from Pseudomonas fluorescens FW300-N1B4

 Score =  218 bits (556), Expect = 4e-61
 Identities = 155/492 (31%), Positives = 248/492 (50%), Gaps = 26/492 (5%)

Query: 20  FAVTGGFIALFCAYALFDIEGLSALVDTSFAFSAKYFGLYWQVLLLATFLIGLVLCFLPG 79
           FA T  FI LF    +   E   A +  +  ++A   G Y+ +L +  +L+ +V+  L G
Sbjct: 8   FAAT--FILLFAVVVMAIPEQAGAWLLEAQNWAANTVGWYY-MLAMTLYLVFVVVTALSG 64

Query: 80  SRTLMGGLS--TPEFGTFSWAAMIMCTLLAGGGVFWAAGEPIAHFLSTPPVFGDLSGDVQ 137
              +  G     PEF   SWA M+    ++    F+   EP+ H L+ PP     + D  
Sbjct: 65  YGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTH-LAQPPQGEAGTADAA 123

Query: 138 AQAHAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGLPLAPRTLLYPLLGDRALSGPI 197
            QA   L   FLHWG   W +  +   + L ++ Y   LPLA R+ LYPL+G R ++GPI
Sbjct: 124 RQAMQIL---FLHWGLHGWGVF-AFVGMALAYFAYRHNLPLALRSALYPLIGKR-INGPI 178

Query: 198 GLIADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPDTFATQAIAILALVGLYTVSAI 257
           G   D   IIA V G    +GF  L ++ GL+ L GI  T   Q   I  ++G   + A+
Sbjct: 179 GYAVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAIIVAV 238

Query: 258 TGLAKGIKILSQINVLLAVVLLIFMLVAGPTMNIFAGFFGGMQVY--ATHFFDMAMYRGD 315
           +G+ KG++++S IN+LLA  LL+F+L AGPT ++       +  Y  A       +Y  D
Sbjct: 239 SGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNLGDYLGALPMKSFDLYAYD 298

Query: 316 AGLFGDAGWLGWWTVFFWGWFMGYGPLMAVFIARISRGRSIRQIIITLSIAAPLITNFWF 375
                 + WLG WTVF+W W++ + P + +FIARISRGR+IR+ +  + +     T  W 
Sbjct: 299 K----PSDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWM 354

Query: 376 TIIGGSGIFFEIAEPGVVSGPFEGFNLPA-GLLAITQAMPMGLILSVLFLVLTMCFVATT 434
           +I G S I  ++   G+ +      + P+  L  + +  P    +  + + ++  F  T+
Sbjct: 355 SIFGNSAI-DQVLNHGMSALGMSAIDNPSMTLYLLLETYPWSKTVIAVTVFISFVFFVTS 413

Query: 435 SDSMSYVISSTMTDG-----EPSTAMRAFWGLAMGVMALILISTGEGGIGKLQSFIVVTA 489
           +DS + V+S+    G     +    +R FWG    ++   L+ +  G I  L+S +V+T+
Sbjct: 414 ADSGTVVLSTLSAKGGNPDEDGPKWLRVFWGAMTALVTSALLFS--GSIDALKSAVVLTS 471

Query: 490 VPVSLILLPSLW 501
           +P SLILL  +W
Sbjct: 472 LPFSLILLLMMW 483