Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 684 a.a., choline transporter from Rahnella sp. WP5

 Score =  219 bits (557), Expect = 3e-61
 Identities = 157/525 (29%), Positives = 257/525 (48%), Gaps = 39/525 (7%)

Query: 1   MSDTTRTPGLAPKGA-DKALFAVTGGFIALFCAYALFDIEGLSALVDTSFAFSAKYFGLY 59
           ++DTT      P+   +K +F  + G I  F    +F  +     +  +  + +  FG  
Sbjct: 3   IADTTERKSEKPRDQLNKVVFFTSAGLILAFTLMTIFFTDLSGKWISLTLNWVSATFG-- 60

Query: 60  WQVLLLATFLIGLVL---CFLPGSRTLMGGLSTPEFGTFSWAAMIMCTLLAGGGVFWAAG 116
           W  +L AT  I  V+   C   GS  L    S PEF   SWAAM+    +    +F++  
Sbjct: 61  WYYMLAATLYIVFVVFIACSRFGSIKLGPEQSKPEFSMMSWAAMLFAAGIGIDLMFFSVA 120

Query: 117 EPIAHFLSTPPVFGDLSGDVQAQAHAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGL 176
           EP+  ++  P    + +G     A  A+  +  H+G   WA+  +L  + L ++ Y   L
Sbjct: 121 EPVTQYMLPP----EGNGQTLEAARQAMTWTLFHYGLTGWAMY-ALMGIALGYFSYRYNL 175

Query: 177 PLAPRTLLYPLLGDRALSGPIGLIADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPD 236
           PL  R+ LYP+ G R ++GPIG   D + ++  + G    +G   +Q++YGL  L  IP+
Sbjct: 176 PLTIRSALYPIFGKR-INGPIGHSVDIAAVVGTIFGIATTLGIGVVQLNYGLKVLFHIPE 234

Query: 237 TFATQAIAILALVGLYTVSAITGLAKGIKILSQINVLLAVVLLIFMLVAGPTMNIFAGFF 296
               QA  IL  V + TVS  +G+ KGI+ILS++NVLLA+ L++F+L  G T  +     
Sbjct: 235 NLTVQAALILLSVIMATVSVTSGVNKGIRILSELNVLLALGLILFLLFFGNTEFLLNALV 294

Query: 297 GGMQVYATHFFDMAMYRGDAGLFGDAGWLGWWTVFFWGWFMGYGPLMAVFIARISRGRSI 356
             +  Y   F  M M            W+  WT+FFW W++ + P + +F+ARISRGR+I
Sbjct: 295 LNIGDYINRF--MGMTLNTFAFDRPTEWMNSWTLFFWAWWVAWSPFVGLFLARISRGRTI 352

Query: 357 RQIIITLSIAAPLITNFWFTIIGGSGIF------FEIAEPGVVSGPFEG-FNLPAGLLAI 409
           RQ +    I   + T  W +I G S ++       + A   V+S P  G ++L A     
Sbjct: 353 RQFVFGTLIIPFVFTLLWLSIFGNSALYQILHGNLDFANE-VISHPERGVYSLLAQYPGF 411

Query: 410 TQAMPMGLILSVLFLVLTMCFVATTSDSMSYVI---SSTMTD--GEPSTAMRAFWGLAMG 464
           T +  +  I  +LF V       T++DS S V+   +S + D   +    +R FW + +G
Sbjct: 412 TLSASVATITGLLFYV-------TSADSGSLVLGNFTSKLADINNDAPNWLRIFWSVTIG 464

Query: 465 VMALILISTGEGGIGKLQSFIVVTAVPVSLI---LLPSLWDALRI 506
           V+ L ++ T   G+  LQ+  V+  +P S +   ++  L+ +LR+
Sbjct: 465 VLTLGMLMT--DGVSALQNTTVIMGLPFSFVIFFIMAGLYKSLRL 507