Pairwise Alignments

Query, 323 a.a., transcriptional regulator, DeoR family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 320 a.a., DeoR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  100 bits (250), Expect = 4e-26
 Identities = 86/327 (26%), Positives = 140/327 (42%), Gaps = 17/327 (5%)

Query: 2   SRTIKLDQIDPEEQLLVRLAWACEFEGMTQAAAAKRFNVTRLRVNRALSEARRRGILRVN 61
           S T KLD       L  R AW     G TQ   A+R  ++R    R ++ A    +++V 
Sbjct: 3   SSTSKLD-------LAARAAWMYYVAGNTQNEIAERLGISRQMAQRMVAYAADANLVKVQ 55

Query: 62  IDSVFAAAAELEWNLERRFRLKQAVVVP------SPQDARSVTQLVSAGLGGLLGELLRD 115
           I    ++  EL   L+ R+ L    VVP      +P +++ V Q+++     L+ + L  
Sbjct: 56  ITHPVSSCLELAQGLQERYGLDVCRVVPGAGGAGNPNESQEVQQMLAVAGAELMEQYLGS 115

Query: 116 KEITHFGMSWGNTLNMATRHMQPLDRPDLEIVSIMGGVSRGSDVNGYEITTRLADLCNAE 175
           +      +  G TL  A   +  L+RP  +IVS++G  +     N Y++  + A+   A 
Sbjct: 116 EAPLVVNVGSGRTLKAAIERLSELERPQHQIVSMIGAFASDGSANRYDVALQAAEKLGAR 175

Query: 176 HSFFTAPLYAGSAESRTLFVEQDVIRDM--LEKIRSCQAIALATGDLESSLLVQDALPSG 233
                AP  A S   R  +      + +  L +      + + T  L+ ++     +  G
Sbjct: 176 FYLLPAPRVAESESDRQQWCNHRAYKIVTGLAERADVTFLGIGTIALQGAMHEDGFIDDG 235

Query: 234 ITADELRALGGVGDITGHILDAKGELIDHPLNQRVIGMSLDDMAKIDNVILAAGGLHKVA 293
             A EL+  G VG++  H  D  G ++   L+ RV    L    +   VI   GG  K  
Sbjct: 236 EVA-ELQRQGAVGEMICHAFDIDGVMLPSSLSARVTTPPLTQRPQ-RPVIAFCGGSKKAE 293

Query: 294 VINAALTRGFVDTLVTDEYTAVALLED 320
            + AAL  G++  LVTDE  A   L+D
Sbjct: 294 AVRAALRGGWLTGLVTDEVCARHALQD 320