Pairwise Alignments

Query, 447 a.a., ABC transporter for Xylitol, periplasmic substrate-binding component (from data) from Dinoroseobacter shibae DFL-12

Subject, 451 a.a., sugar ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 84/358 (23%), Positives = 149/358 (41%), Gaps = 48/358 (13%)

Query: 4   LRNLLCSAAVASVMASGAMADGHGWSLKDAAAPYAGTTVDVVFLLRPGYEAIEAMLPAFE 63
           +R  L +AA++++ A+G              A     T+++  +  P    ++ + PAFE
Sbjct: 15  VRFTLAAAAISTLFAAGL-------------AQAEPVTLNIASINNPDMIELQKLAPAFE 61

Query: 64  EET-GIKVNVIKHPYENALGEQVRDFVA--GGDLDVALIDLVWIGSFAENEWILPLADVQ 120
           +    IK+  +    E+ L +++   +A   G  D+  I       +A+  W+ P+  + 
Sbjct: 62  KANPDIKLRWVTME-ESVLRQRLTTDIATNSGQFDLMTIGAYEAPIWAKKGWLAPMTGLP 120

Query: 121 AKFPDA-----VDPDLDIDDFFPLVLNAFGGWNDTIYGLPFDNYSGLMFYNRCMLEEAGF 175
           A + +A     V   L +D                +Y LPF   S + +Y + + E+   
Sbjct: 121 ADYDEADLIKPVREGLSVDG--------------KLYALPFYAESSMTYYRKDLFEQKKL 166

Query: 176 DGPPS-TWEELK----DVYGPALTKDGKYAFALQSKRNETQSADSFARMLWPFGGSFLNE 230
             P   TW+E+      ++ PA    G Y   L+ +    ++      M   +GG + +E
Sbjct: 167 TMPQRPTWDEIAKLAAQLHDPA---KGVYGICLRGRAGWGENMAIITTMANAWGGRWFDE 223

Query: 231 EFRSNLMSEGSQAGLKFRQELM-EYMPDGIVAYDHAETVNAFSQGDVAMITEWSAFYSSV 289
           +++  L S   +  + F  +LM +Y P G  +    E +  FS G   M  + +     +
Sbjct: 224 QWQPQLSSPEWKKSVAFYVDLMRKYGPPGASSNGFNENLVLFSSGKCGMWVDATVAAGML 283

Query: 290 VSPETSRVADCVEIAPEPMGPAGR-KPALGGFSLAVASQADEAEQAAAYLFIQWATSK 346
              + S+VAD    AP PM    +    L  +SLAV   +    Q AA  F  WATSK
Sbjct: 284 YHGKDSKVADKTAFAPSPMQVTDKGSHWLWIWSLAVPKSS--KSQDAAKKFAAWATSK 339