Pairwise Alignments

Query, 498 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  284 bits (726), Expect = 6e-81
 Identities = 170/468 (36%), Positives = 271/468 (57%), Gaps = 11/468 (2%)

Query: 6   KSFGKNNVLRGIDLTLDPGSVTVLMGANGAGKSTLVKVICGQHRADGGTMRLATNAFDPE 65
           KSFG+   L+G+ L +  G V  L+G NGAGKSTL+K++ G H A  G + L   A+ P 
Sbjct: 17  KSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHGATSGEIVLDGQAYRPA 76

Query: 66  DAADAIRQGVVTVHQSIDDGVIPDLDVANNLMLDRLAEHSHGLFVRERHLRTEAAKVAAA 125
           +  +A   G+  V Q +   +  +L VA N++  R  E     F+ ++ L  +A ++ A 
Sbjct: 77  NPQEAASLGLAIVFQELS--LCNNLTVAENILATR--EPRRFGFINDKALVAKAHRIVAD 132

Query: 126 MGIEVNLRARVSDLSVADRQMIAIARAMARAPKVLILDEPTSSLSATEADRLFELIDRLR 185
           + + +++  +V +LS+A RQ++ IA+ ++   KV+ILDEPTSSLS +EA+ LFE+I RLR
Sbjct: 133 LRLPIDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEAEILFEIIGRLR 192

Query: 186 AQGVAILYISHRMSDIRRIADRIVVMRDGMISGVFETEPLDLEAAVTAMLGHRMTEVDA- 244
            +G AI+YISHRM +I R++D I V+RDG        + + +E  +  M+G RM E+   
Sbjct: 193 QRGAAIIYISHRMEEIMRLSDDITVIRDGEYVSTHARDEVTIETLIALMVGRRMDEIYPP 252

Query: 245 ---EVRQGTHPVLEIKNLQLFEGASPITLTAHDGEVVALVGLLGSGKSRLAEILFGIARP 301
               V     PVL +  L        ++     GE++   GL+GSG+S +   LFG+ + 
Sbjct: 253 PVHHVAADRAPVLAVDRLTREGEFQDVSFDVRAGEILGFFGLVGSGRSEVMNALFGM-KS 311

Query: 302 IRGSIRIKGKDYSPRSVKDAIAQGVFMSPKDRGTNAVIPAFDIADNMTLPFLQGMSVG-S 360
             G++R+ G+    RS   AIA+GV    ++R    ++    +  N+++  L   + G  
Sbjct: 312 AAGTVRLDGEVVRFRSPDQAIARGVGFVTENRKEEGLVLGHSVEWNISMAALADFAGGLG 371

Query: 361 FLKSRQQRGTAQGMVDRLGIVCQSVRDGIGTLSGGNQQKVMIARWLLEPAQVLLLDEPFQ 420
           F+++  +R  A   V +L I   S+    G LSGGNQQK+++A+WLL   +VL+LDEP +
Sbjct: 372 FIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLLTRPKVLILDEPTR 431

Query: 421 GVDIGARRDIGHHIR-ATTQGRATLVFLAEIDEALEIADRIVVMSEGA 467
           GVD+GA+ +I   IR    +G A L+  +++ E L ++DR+VVM EGA
Sbjct: 432 GVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEGA 479



 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 6/217 (2%)

Query: 24  GSVTVLMGANGAGKSTLVKVICGQHRADGGTMRLATNA--FDPEDAADAIRQGVVTVHQS 81
           G +    G  G+G+S ++  + G   A  GT+RL      F   D A A   G VT ++ 
Sbjct: 286 GEILGFFGLVGSGRSEVMNALFGMKSA-AGTVRLDGEVVRFRSPDQAIARGVGFVTENRK 344

Query: 82  IDDGVIPDLDVANNLMLDRLAEHSHGL-FVRERHLRTEAAKVAAAMGIEVN-LRARVSDL 139
            ++G++    V  N+ +  LA+ + GL F+R    R  A++    + I+ N L      L
Sbjct: 345 -EEGLVLGHSVEWNISMAALADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGAL 403

Query: 140 SVADRQMIAIARAMARAPKVLILDEPTSSLSATEADRLFELIDRLRAQGVAILYISHRMS 199
           S  ++Q I +A+ +   PKVLILDEPT  +       ++++I  L A+G AIL IS  + 
Sbjct: 404 SGGNQQKIVLAKWLLTRPKVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLP 463

Query: 200 DIRRIADRIVVMRDGMISGVFETEPLDLEAAVTAMLG 236
           ++  ++DR+VVM +G      E   L  E  +    G
Sbjct: 464 EVLGMSDRVVVMHEGAPGATLEGSALTPETIMAHATG 500