Pairwise Alignments

Query, 498 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  273 bits (698), Expect = 1e-77
 Identities = 165/472 (34%), Positives = 265/472 (56%), Gaps = 8/472 (1%)

Query: 3   GLQKSFGKNNVLRGIDLTLDPGSVTVLMGANGAGKSTLVKVICGQHRADGGTMRLATNAF 62
           G++K F     L  ++  L  G+V  LMG NGAGKSTL+K++ G +  D G ++L     
Sbjct: 28  GVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGI 87

Query: 63  DPEDAADAIRQGVVTVHQSIDDGVIPDLDVANNLMLDRLAEHSHGLFVRERHLRTEAAKV 122
             +   DA+  G+  +HQ ++  ++P + VA N+ + R  ++  G FV    +R   AK+
Sbjct: 88  RLKSPLDALENGIAMIHQELN--LMPFMTVAENIWIRREPKNRFG-FVDHGEMRRMTAKL 144

Query: 123 AAAMGIEVNLRARVSDLSVADRQMIAIARAMARAPKVLILDEPTSSLSATEADRLFELID 182
              + I+++    V  LSVA+RQM+ IA+A++    VLI+DEPTS+L+  E   LFE+I 
Sbjct: 145 FERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEIIR 204

Query: 183 RLRAQGVAILYISHRMSDIRRIADRIVVMRDGMISGVFETEPLDLEAAVTAMLGHRMTEV 242
            LR+QG+ I+YI+H+M+++  IAD   V RDG   G   +  +  +  +  M+G  +T++
Sbjct: 205 DLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGREITQM 264

Query: 243 --DAEVRQGTHPVLEIKNLQLFEGASPITLTAHDGEVVALVGLLGSGKSRLAEILFGIAR 300
               EV  G   VL +KNL L      ++     GE++ + GL+GSG+S +AE LFG+  
Sbjct: 265 FPKEEVPIG-DVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAETLFGVTP 323

Query: 301 PIRGSIRIKGKDYSPRSVKDAIAQGVFMSPKDRGTNAVIPAFDIADNMTLPFLQGMSV-G 359
              G+I I GK+    S   AI   +    +DR     +   DI +NM +  LQ   V  
Sbjct: 324 ASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCLLILDILENMQIAVLQDKFVKR 383

Query: 360 SFLKSRQQRGTAQGMVDRLGIVCQSVRDGIGTLSGGNQQKVMIARWLLEPAQVLLLDEPF 419
            F+  R+     + M  +L +   ++++ +  LSGGNQQKV+I RWLL   ++L+LDEP 
Sbjct: 384 GFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLTNPRILILDEPT 443

Query: 420 QGVDIGARRDIGHHI-RATTQGRATLVFLAEIDEALEIADRIVVMSEGAIVG 470
           +G+D+GA+ +I   +      G A ++  +E+ E L ++DRI+VM EG + G
Sbjct: 444 RGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHEGRVTG 495



 Score = 94.4 bits (233), Expect = 9e-24
 Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 5/220 (2%)

Query: 6   KSFGKNNVLRGIDLTLDPGSVTVLMGANGAGKSTLVKVICGQHRADGGTMRLATNAFDPE 65
           K+   N V R +   +  G +  + G  G+G+S + + + G   A  GT+ +       +
Sbjct: 280 KNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAETLFGVTPASSGTIAIDGKEVVID 339

Query: 66  DAADAIRQGVVTVHQSIDD-GVIPDLDVANNLMLDRLAEH--SHGLFVRERHLRTEAAKV 122
            A  AIR  +  + +   D G +  LD+  N+ +  L +     G FV ER +     ++
Sbjct: 340 SANKAIRHRMAFLTEDRKDTGCLLILDILENMQIAVLQDKFVKRG-FVSEREVTAACEEM 398

Query: 123 AAAMGIEV-NLRARVSDLSVADRQMIAIARAMARAPKVLILDEPTSSLSATEADRLFELI 181
           +  + ++  NL+ RV +LS  ++Q + I R +   P++LILDEPT  +       +  L+
Sbjct: 399 SRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLTNPRILILDEPTRGIDVGAKAEIHRLV 458

Query: 182 DRLRAQGVAILYISHRMSDIRRIADRIVVMRDGMISGVFE 221
             L   GVA++ IS  M ++  ++DRI+VM +G ++G+ +
Sbjct: 459 TELARNGVAVIMISSEMPEVLGMSDRIMVMHEGRVTGILD 498



 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 12/207 (5%)

Query: 275 GEVVALVGLLGSGKSRLAEILFGIARPIRGSIRIKGKDYSPRSVKDAIAQGVFMSPKDRG 334
           G V AL+G  G+GKS L +IL GI  P +G ++++G     +S  DA+  G+ M  ++  
Sbjct: 49  GTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGIRLKSPLDALENGIAMIHQELN 108

Query: 335 TNAVIPAFDIADNMTLPFLQGMSVGSFLKSRQQRGTAQGMVDRLGIVCQSVRDGIGTLSG 394
              ++P   +A+N+ +        G       +R TA+ + +RL I      + +  LS 
Sbjct: 109 ---LMPFMTVAENIWIRREPKNRFGFVDHGEMRRMTAK-LFERLKIDLDPEIE-VRHLSV 163

Query: 395 GNQQKVMIARWLLEPAQVLLLDEPFQGVDIGARRDIGHHIRAT----TQGRATLVFLAEI 450
            N+Q V IA+ +   + VL++DEP   +     R++ H         +QG   +    ++
Sbjct: 164 ANRQMVEIAKAVSYESDVLIMDEPTSAL---TEREVAHLFEIIRDLRSQGIGIVYITHKM 220

Query: 451 DEALEIADRIVVMSEGAIVGEHTNRNI 477
           +E  EIAD   V  +G  +G H +  +
Sbjct: 221 NELFEIADEFSVFRDGKYIGTHLSNEV 247