Pairwise Alignments

Query, 346 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 71/272 (26%), Positives = 102/272 (37%), Gaps = 30/272 (11%)

Query: 67  VNLRVFDSRQDAALQADMVDQAIALGVDGIIIQHGLTESMREAAQRAVDAGIKVVAFDVN 126
           V L + D       Q   V+  I   VD +++    +  +    Q+A+DA I V   D N
Sbjct: 66  VELIITDGEDRTEKQVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRN 125

Query: 127 VENAAIPQ-VEQSDYLLGKLALEQAIK-DNGDSFAAGYVYV----PGIAPLDRRHAAWEE 180
           VE     Q V   + L+G+ A E A++   G   A G +       G  P   RH  + E
Sbjct: 126 VETDQYTQFVGGDNKLIGRAAGEYAVELLGGKGKAEGNIVEIWGGMGTQPAHDRHDGFHE 185

Query: 181 VKTANPGITEEARIGTLDNPIANANANQA----RAALQANPNISVFFAPYNEFAKGVKIA 236
                PGI        LD    +   +QA      AL+ N  I + +   +  A G  +A
Sbjct: 186 FTDKEPGIK-----NLLDQQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLA 240

Query: 237 ADELGLSGEMSIYSADISTADIALMREPGSAW----KATVATNPAVVGEVSVRALALMLA 292
           A + G   EM     D      AL  E G  W    + T     A  G   +R     L 
Sbjct: 241 AKDAGREKEMKFIGID------ALPNE-GVTWVNNGELTATFLYATPGAEGLRQAVKFLK 293

Query: 293 GEDPGASVIVPPTLITQAFLNDNDIRNMEDLG 324
           GE    +V    TL T     +N  + ++D G
Sbjct: 294 GEKVEKTV----TLDTMKVTKENAAQILKDNG 321