Pairwise Alignments

Query, 346 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 309 a.a., rhizopine binding protein from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 77/317 (24%), Positives = 124/317 (39%), Gaps = 32/317 (10%)

Query: 11  SAASLALGAGAATAQEAPAPLDTPEEVTIALVRYLSTGDFFQAYLSGVETQAAAL-GVNL 69
           SAA LAL AG+A A          E V I + R  S   F     +G++ QAA L GV +
Sbjct: 6   SAAVLALFAGSAHA----------ENVGITIAR--SDSAFLTILRNGMQDQAAKLDGVTV 53

Query: 70  RVFDSRQDAALQADMVDQAIALGVDGIIIQHGLTESMREAAQRAVDAGIKVVAFDVNVEN 129
           +V D++ D + Q D V   ++ GVD II+     +S     + A DAGI +V    N   
Sbjct: 54  QVEDAQNDTSRQLDQVQNFVSSGVDAIIVVAVDGDSTPALTKMATDAGIPIVY--ANHPP 111

Query: 130 AAIPQVEQSDYLLGKLALEQAIKDNGD------SFAAGYVYVPGIAPLDRRHAAWEEVKT 183
           A + ++ ++   +G   ++    +  +         A YV    + PL+  H++    K 
Sbjct: 112 ADVDKLPETAAFVGSNEIDSGTLETKEVCRLLGGKGAAYVL---MGPLN-NHSSLTRTKD 167

Query: 184 ANPGITEEARIGTLDNPIANANANQARAA------LQANPNISVFFAPYNEFAKGVKIAA 237
            +  I  +   G       +AN ++  AA      L      +   A  +E A G   A 
Sbjct: 168 IHDVIATDECKGMSVIEEQSANWDRLEAANIMTNWLSTGREFNAIIANNDEMAIGAIQAM 227

Query: 238 DELGLSGEMSIYSADISTADIALMREPGSAWKATVATNPAVVGEVSVRALALMLAGEDPG 297
              G+     +     +T D  L          TV  N    G  ++ A   +   +   
Sbjct: 228 KAAGVDMSKVVVGGIDATPD-GLAAMAAGDLDVTVFQNAIAQGAAAMDAAVALSRDQKTA 286

Query: 298 ASVIVPPTLITQAFLND 314
             + VP  L+T   + D
Sbjct: 287 RQIWVPFELVTPENMKD 303