Pairwise Alignments

Query, 299 a.a., histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (272), Expect = 2e-28
 Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 15/234 (6%)

Query: 54  KRRRRAAAELAQQRAEVARLSRVSQLGELSGAIAHELKQPLTSILMNAESGRALLRQSPP 113
           + R+RA A L + + E+ + ++++ +G+   ++AHEL QPL+++     S R  L ++P 
Sbjct: 539 EERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYLFSARLALEEAPQ 598

Query: 114 DLREIAEILEDIANDDRRAAGVIDNLRKLLGEGAPD--FQPVELNDVVRATLRLIRSELI 171
              ++A  L+ I N   R   ++++LR    + + D   QPV LN VV   L L+++   
Sbjct: 599 --AQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNSVVEQALVLVQT--- 653

Query: 172 ARSVRTDLKLCEAA---LIATGNAEQLQQVLLNLIFNATDGMADQPRK-TRRISIETTLR 227
            ++ R  +KL       L+   +A  L+QVL+NLI N  D      +   + I++ T   
Sbjct: 654 -KAKRQQIKLINTLPDDLMVMADALSLEQVLINLIVNGCDASTTFAQPWVKLIALGTE-- 710

Query: 228 TDGMREVSVTDTGPGLPEAVRDAAFQPFVTTKAHGMGLGLSISRTIAEAHGGQL 281
             GM+ ++V D+G G    V D  F PF TTK  G+GLGLSI +++ E   G++
Sbjct: 711 -QGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRI 763