Pairwise Alignments

Query, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 239 a.a., integrase catalytic subunit from Marinobacter adhaerens HP15

 Score =  136 bits (343), Expect = 4e-37
 Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 4/218 (1%)

Query: 13  RRACALAGIDPRVYRRRSKRLADT-ELRVRMKELASERRRFGYRRLHMLLKR-EGWEVNW 70
           R AC    +    YR ++K  ++  E+   +  L   +R +G+    + L+  +G+  N 
Sbjct: 14  RLACVTFSVSESCYRYQAKLSSENAEIADLLVRLTHNQRNWGFGLCFLYLRNVKGYPWNH 73

Query: 71  KKLYRLYRDEGLTVRKRGGRKRAVGTRT-PMAIPQGPNQRWSLDFMSDALEDGRRFRVLN 129
           K++YR+YRD  L +R +  RKR V  +  P+A+P   N  WS+DFM D LEDGR +R+ N
Sbjct: 74  KRVYRIYRDLELNLRIKP-RKRLVREKPEPLAVPTAINSSWSMDFMHDQLEDGRSYRLFN 132

Query: 130 VIDDFSRECLAAVVDTSISGARVARELDRIAELRGYPCLVVSDNGTELTSNAMLKWQEDR 189
           VIDD++RE L   VD S+   RV R L++I E RG       DNG E  S  +  W E  
Sbjct: 133 VIDDYNREGLGIEVDLSLPSGRVIRALEQIIEWRGETRSDPLDNGPEYISTLLSTWAEKN 192

Query: 190 KVDWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSL 227
            +   +I PG P QN  +E +N  +R + L ++LF S+
Sbjct: 193 GITLVFIQPGNPQQNAYIERYNRTVRYDWLAQYLFDSI 230