Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 232 a.a., two-component system response regulator RppA from Synechocystis sp000284455 PCC 6803

 Score =  119 bits (298), Expect = 5e-32
 Identities = 84/222 (37%), Positives = 116/222 (52%), Gaps = 12/222 (5%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGI--YSGAIVDVMLGSDSG 61
           RLL+VED+P++   L + L    Y  +     + A S L  G   Y+ AI D M+   SG
Sbjct: 2   RLLLVEDEPDLGMVLEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61

Query: 62  VELVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRA 121
           +EL +  R   ++LPILML+A   + DR  GL AGADDY++KPF   EL+ARLR  + R 
Sbjct: 62  LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR- 120

Query: 122 LAQRVSPARLIRTSRRLEMG------PD--SVTLTEREFDLLALLIRSGEDPQPRSQLHA 173
            +  + P +L     RL+ G      PD   ++LT +EF LL   ++  +      Q+  
Sbjct: 121 -SPELQPQQLQVGDWRLDYGTFVVVTPDKQQISLTAKEFQLLEYFMKHPQQILSSEQIKN 179

Query: 174 TLWAAEGASTENVVDVYVGYLRRKLETADFGFEIKTVRNRGF 215
            LWA    ST NVV   V  LRRKL     G  I+TV   G+
Sbjct: 180 QLWALSAESTSNVVAAQVRLLRRKLGEYSHGNLIETVYGLGY 221