Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 229 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  107 bits (268), Expect = 1e-28
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGVE 63
           R+L+V+D+  +T+ L R L   GY+ +  +         T   Y   I+D ML   SG++
Sbjct: 2   RILLVDDEEALTAPLHRMLRREGYDVDVASDGQTGEQLATHQPYDLLILDWMLPERSGLD 61

Query: 64  LVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRALA 123
           L R+ R     +P+L L+A   V+DR  GL AGADDY+VKPF   EL+AR+R    R+  
Sbjct: 62  LCRSVRQRDRQVPVLFLTARDTVDDRVQGLDAGADDYLVKPFELKELLARVRALLRRSPR 121

Query: 124 QRVSPARLI---------------RTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPR 168
           Q  S A  +               R  RR+E       L+E+E  LLA+L++        
Sbjct: 122 QETSEAPRLAGGDLELDTPNQLAYRQGRRIE-------LSEKETQLLAVLMQHPGQLVSH 174

Query: 169 SQLHATLWAAEGASTENVVDVYVGYLRRKLETADFGFEIKTVRNRGF 215
            +L A +W +    + NV+   +  LRRKLE       I +V  +G+
Sbjct: 175 QELQAQVWGSANPPSSNVLAAQIRLLRRKLEAPGETPLIFSVYGKGY 221