Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 224 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (280), Expect = 6e-30
 Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 14/228 (6%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGVE 63
           +LL+VED+  +   L + L   GY  +  +RA  A   +    Y   I+D+ L   +G++
Sbjct: 2   KLLLVEDNTLLVDELAKQLKQAGYVTDVTDRAAEADYLIKETHYDCVILDIGLPDGNGLQ 61

Query: 64  LVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRALA 123
           L+ T R  G   P++ML+A S   ++  G  AGADDY+ KPFH  EL+AR+    +RA  
Sbjct: 62  LLETWRNQGIDTPVIMLTARSQWHEKVEGFNAGADDYLGKPFHSQELLARIHALINRAHG 121

Query: 124 QRVSPAR--------LIRTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPRSQLHATL 175
           +  SP +        L  + + + +G     LT  EF LL + + S +    ++QL   L
Sbjct: 122 KTNSPTKELSFEGVTLDESQQSVTVGEQQFELTAMEFRLLKIFLMSPKKLLSKAQLTDKL 181

Query: 176 WAAEGASTENVVDVYVGYLRRKL-ETADFGFEIKTVRNRGFCISGRRP 222
           +  +     NVV+VYV +LR+KL +TA     I+T R +G+   G +P
Sbjct: 182 YQFDDEKESNVVEVYVTHLRKKLGKTA-----IETRRGQGYIFHGLKP 224