Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 225 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  119 bits (299), Expect = 4e-32
 Identities = 80/226 (35%), Positives = 123/226 (54%), Gaps = 11/226 (4%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGVE 63
           R+LIVEDD  +   +  GL   G++A+     + A   L +  ++  ++D+ L   SG+E
Sbjct: 2   RILIVEDDQALGEGIQMGLRQGGWQADWVQDGEAAGHALASEPFAALVLDLGLPKVSGLE 61

Query: 64  LVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRALA 123
           ++R  RA G  +P+L+L+A    +D   GL AGADDY++KPF+  EL ARLR    R   
Sbjct: 62  VLRQLRARGDAMPVLILTARDAPDDVVAGLDAGADDYMIKPFNLQELGARLRALTRRRGG 121

Query: 124 QRV-----SPARLIRTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPRSQLHATLWAA 178
           + V        RL    RR+ +   +V L+ REFDLL  L+        ++Q+ + L+A 
Sbjct: 122 RAVPEIVHGNLRLDPAGRRVTLAGQAVELSAREFDLLHELLAQAGRVLTKAQIESHLYAW 181

Query: 179 EGASTENVVDVYVGYLRRKLETADFGFEIKTVRNRGFCI--SGRRP 222
                 N ++V++ +LRRKL  AD    I+TVR  G+ I  +GR P
Sbjct: 182 GSELESNAIEVHIHHLRRKL-GADL---IRTVRGVGYLIPEAGRSP 223