Pairwise Alignments

Query, 536 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (259), Expect = 2e-26
 Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 24/329 (7%)

Query: 199 MALGIALAAGLSVAAFYFGLVRPQFYRLDAVRSAADQIGRGDFSGVLPVSRLDEIGQLSQ 258
           + +GI L+ G+  +   + + RP    +  +++  D+I RG     +      E+  L +
Sbjct: 182 LVIGILLS-GVFASRLMYDVTRP----ITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKK 236

Query: 259 QTNRMAAALSD----RQAKVDAEWTQLNEIIAT---RTKELKQANARLEKTDEDRRRFFA 311
             N MA +LS+     Q  +D   + L E +     +  EL  A  R ++    +  F A
Sbjct: 237 GINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLA 296

Query: 312 DVSHELRTPLTVIL--MEAQIGRQSIPAAADAFATIEARAERLNRKIDDLLRLARSETGQ 369
           ++SHELRTPL  ++      +  Q   + AD   TIE  A  L   I+D+L  ++ E G+
Sbjct: 297 NMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGK 356

Query: 370 LALACVPVALDALVASAI--EEVQAELDNAGMTLDLVPFRETQVRADPDWLRQVLVSLVR 427
           LAL  +P     ++   +  +   A      +TL + P     V  DP  ++QVL +LV 
Sbjct: 357 LALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVG 416

Query: 428 NAIRHARSGEKLRIAPVVQRTQAGV-----SITDNGPGIPASRQYQVFERFSQGAGATSA 482
           N+I+    G  + ++  ++  +  V      + D G GI   +Q Q+F+ FSQ   + S 
Sbjct: 417 NSIKFTERG-NIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISR 475

Query: 483 Q--GFGIGLALARWVIDAHGGEISLQSPL 509
           +  G G+GL + + ++   GGEISL S L
Sbjct: 476 RYGGTGLGLVITQKLVSHMGGEISLTSRL 504