Pairwise Alignments

Query, 536 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  115 bits (288), Expect = 5e-30
 Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 27/302 (8%)

Query: 217 GLVRPQFYRLDAVRSAADQIGRGDFSGVLPVSRLDEIGQLSQQTNRMAAAL--SDRQAKV 274
           G+++P    L+ ++  A+ +  G +   + V   DE G+L++  N+MA  +  SD + K 
Sbjct: 339 GIIKP----LEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFNKMATQINISDDKLKK 394

Query: 275 DAEWTQLNEIIATRTKELKQANARLEKTDEDRRRFFADVSHELRTPLTVILMEAQIGRQS 334
            AE             ELK +   L++ D+ +    A VSHELRTPLT I    ++    
Sbjct: 395 HAE-------------ELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDG 441

Query: 335 IPAAAD-----AFATIEARAERLNRKIDDLLRLARSETGQLALACVPVALDALVASAIEE 389
              A +          +    RL R I+ +L L++ E G+L +    V L ++V   IE 
Sbjct: 442 TMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEY 501

Query: 390 VQAELDNAGMTLDLVPFRETQVRADPDWLRQVLVSLVRNAIRHARSGEKLRIAPVVQRTQ 449
           ++       + L+     +  + AD D + QVL +L+ NAI+ + + E + ++ V++   
Sbjct: 502 LKPLATEKNIKLNK-EVEDIAIEADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEH 560

Query: 450 AGVSITDNGPGIPASRQYQVFERFSQGAGATSAQ--GFGIGLALARWVIDAHGGEISLQS 507
             + +TD G GIP     ++F RF Q   +T  +  G G+GLA+ + +++AH G I ++S
Sbjct: 561 IHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVES 620

Query: 508 PL 509
            L
Sbjct: 621 EL 622