Pairwise Alignments

Query, 236 a.a., Endonuclease/exonuclease/phosphatase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 611 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 24/241 (9%)

Query: 5   LASWNIRAGLGRDLRRRPLRTIEVITGLDADILVLQEADF--RMQPRPAALPAPRGRIGP 62
           L ++NI+   G D      R   VI     D++ +QE D       +   L     R   
Sbjct: 28  LMTYNIKNATGMDGVCDFQRIANVINNASPDVVAVQEVDSVTNRSNQKYVLGEIAERTQM 87

Query: 63  FRVIDLTPDAVGLGWHGIAVLKHPAVKVDGIRRYDLPALEPRGAVVV---DIRVRQCPLR 119
           +       D  G G +GI +L   A     ++   LP  E   A+++   +  +  C   
Sbjct: 88  YACFAPAIDYDG-GKYGIGLLSKKAPV--HLQTIALPGREEARALILAEFEDYIYCC--- 141

Query: 120 VVGVHLGLLRGNRRKQIAYIAEQLAALDQRPTIIAGDFNEWRERKGLETLPDWLR--THS 177
               HL L   +R K +  I +  AA  ++P  +AGD N   E   ++ L    R  ++ 
Sbjct: 142 ---THLSLTEEDRMKSLE-ILKTFAASYKKPLFLAGDMNAEPESDFIKELQKEFRILSNP 197

Query: 178 PGPTFPAGRPLLKLDKIAM----SHDITLMDSVVVGDPAAKVASDHRPIWARFRLAPEHE 233
              TFPA  P   +D +A          ++ S VV +P   VASDHRPI    R A + +
Sbjct: 198 RQHTFPAPAPKETIDYVAAFKQNDKGFAVVSSEVVNEP---VASDHRPIVVELRTAEKAD 254

Query: 234 E 234
           +
Sbjct: 255 K 255