Pairwise Alignments

Query, 269 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 280 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  199 bits (505), Expect = 7e-56
 Identities = 100/250 (40%), Positives = 149/250 (59%)

Query: 9   GVSQRRAGKALAVDRSSVRYRSVRPDDAEARAAMKAVAAERRRFGYRRIHVMLERQGIMM 68
           G S+RRA   + +  S++RY      + E R  + A+A   RR+G   I++ L ++G ++
Sbjct: 17  GASERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIV 76

Query: 69  NLKKLRRLYREEKLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDGRQFRVL 128
           N K++ RLYRE++LQVRRR  +K  +G R P+L P   NQ WS+DFV D   +GR  + L
Sbjct: 77  NYKRVERLYREQQLQVRRRKRKKVPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKCL 136

Query: 129 AVVDDYSRECLALVADTSLSGLRVVRELDALMLRRGQPAMVVSDNGTELTSVAVLSWCQR 188
            +VDD + E +A+  + ++SG  V R LD L   RG P ++ +DNG E    A+++W   
Sbjct: 137 VIVDDATHEVVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAHA 196

Query: 189 TGIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQHDYNHHRPHS 248
             ++   I PGKP QN +VESFNGR RDE LNE  F +L  AR +I  W+ +Y+  RP  
Sbjct: 197 RNVQLLLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYHEDRPKK 256

Query: 249 GLGNIPPVEF 258
            +G + P  +
Sbjct: 257 AIGGMTPAAY 266