Pairwise Alignments

Query, 269 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 235 a.a., transposase from Herbaspirillum seropedicae SmR1

 Score =  202 bits (514), Expect = 5e-57
 Identities = 101/229 (44%), Positives = 152/229 (66%)

Query: 10  VSQRRAGKALAVDRSSVRYRSVRPDDAEARAAMKAVAAERRRFGYRRIHVMLERQGIMMN 69
           +S+RR    + +  S +RY++   ++A     +  +A +RRRFGYRRIHV+L R+   +N
Sbjct: 7   LSERRCCGLMNISTSVLRYQARGDNNAALTERITTLAGQRRRFGYRRIHVLLLRRAGWVN 66

Query: 70  LKKLRRLYREEKLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDGRQFRVLA 129
           +K++ RLY +  L VRRR  ++  +  R P+L+P+  N  WS+DFV D L DGR+ R L 
Sbjct: 67  VKRVYRLYFKAGLSVRRRLRKRIGMTERLPLLLPEQANYAWSMDFVHDRLADGRRIRCLN 126

Query: 130 VVDDYSRECLALVADTSLSGLRVVRELDALMLRRGQPAMVVSDNGTELTSVAVLSWCQRT 189
           +VDD+++E +A+  DTS+SGLR+ R LD +   R  P M+  D+G E TS+A+ +W    
Sbjct: 127 IVDDFTKESVAIEVDTSISGLRLGRVLDKVAQERPLPTMIRVDHGPEFTSLALDAWAAGR 186

Query: 190 GIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQ 238
           G++  +  PGKP QN ++ESFNGRFRDE LN+ LFS+L +AR +I AW+
Sbjct: 187 GVKLAFTQPGKPTQNAYIESFNGRFRDECLNDHLFSTLHEARYRIEAWR 235