Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 354 a.a., ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  328 bits (840), Expect = 2e-94
 Identities = 170/341 (49%), Positives = 235/341 (68%), Gaps = 11/341 (3%)

Query: 21  PIAFDRMRY----YLVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQV 76
           P+   R R+     L+L VA   +P++ NDYW +A+++PFL+ ++A +GLN+LTGY GQ 
Sbjct: 16  PLTLVRRRWRPGLLLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQT 75

Query: 77  SLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVA 136
           S+G  GFMAVGA+A Y L+   P L + + ++ GG+I   VG+LFG+PS RIKGFYL V 
Sbjct: 76  SVGAAGFMAVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVT 135

Query: 137 TLAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNADAAPKYLFCLAFLFVL 196
           TLAAQFFL W+F K PWFYNY++SG I+AP   + G+ +T P      +YL  L+ + +L
Sbjct: 136 TLAAQFFLEWVFAKFPWFYNYASSGTISAPRLELLGHNLTTP----VGRYLLTLSCVVLL 191

Query: 197 AWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGALFFSVYL 256
            W+A NL R  +GR+WMAIRDMD AA +IG+   + K  AFAVSSF++G+AGAL+   YL
Sbjct: 192 TWIAANLVRSQVGRNWMAIRDMDTAAAVIGIPVERYKRLAFAVSSFYLGIAGALWAFAYL 251

Query: 257 GAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKN--VMVGSLGWDT 314
           G    G +F IN+SF +LF+IIIGG+GSI GS  GAAFI L+P+LL +  + + +   D 
Sbjct: 252 GTASAG-SFDINRSFQILFIIIIGGMGSIAGSFIGAAFISLVPILLSHAGLWLFNGNVDA 310

Query: 315 AIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWP 355
               + + V+ GGLII+FLI EP GLARL    +E++R+WP
Sbjct: 311 GQLQNLQKVLFGGLIIWFLIKEPEGLARLLGDLRERIRVWP 351