Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 355 a.a., ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  353 bits (905), Expect = e-102
 Identities = 183/358 (51%), Positives = 238/358 (66%), Gaps = 9/358 (2%)

Query: 1   MFYREAGDFKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPFVINDYWASAVMVPFLIWA 60
           MFYRE G F T Y  D + F +  DR     +L  A  ++P++ NDYW SA+++PFL+ +
Sbjct: 1   MFYRETGQFNTRYAQDRRVFALRQDRHGLAALLLFAFVVVPWLGNDYWFSAILIPFLVLS 60

Query: 61  IAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVL 120
           +A +GLN+LTGY GQ+SLG+  FMAVGA+A Y L      L + + + LGG+  A V VL
Sbjct: 61  LAGLGLNLLTGYAGQLSLGSAAFMAVGAFATYNLEIRVAGLPLLVSIALGGLTAALVAVL 120

Query: 121 FGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNA 180
           FGLPSLRIKGFYL V+TLAAQFF+ W   +  WF N SASG I+AP   +FG  +  P  
Sbjct: 121 FGLPSLRIKGFYLLVSTLAAQFFVTWALTRFSWFSNNSASGVISAPRLDVFGVNLDAP-- 178

Query: 181 DAAPKYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVS 240
             A +YL  L+ +  L WL +NL R  +GR+WMA+RDMD AA +IG+   K KL AFA+S
Sbjct: 179 --AGRYLLTLSVVVALFWLGKNLVRSELGRNWMAVRDMDTAAAVIGIALAKTKLLAFAIS 236

Query: 241 SFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPV 300
            FF+GVAGAL+   YLG VE    F +N+SF +LF+IIIGGLGS+ G+  GAAFIVL PV
Sbjct: 237 GFFLGVAGALWAFAYLGTVE-PHGFDLNRSFQILFIIIIGGLGSLLGNFLGAAFIVLFPV 295

Query: 301 LLKN---VMVGSLGWDTAIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWP 355
           LL N   ++ G L  D     + + ++ G LII FLI EP GLARLWQ  +++ RLWP
Sbjct: 296 LLSNLVSLLPGGL-VDAGQVENLQKMIFGALIILFLIKEPEGLARLWQRFRQRARLWP 352