Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 418 a.a., leucine/isoleucine/valine transporter permease subunit from Pseudomonas fluorescens FW300-N2C3

 Score =  138 bits (347), Expect = 3e-37
 Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 34/331 (10%)

Query: 28  RYYLVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVG 87
           R+ ++  + V ++        A  +    LI+ +  +GLNI+ G  G + LG  GF AVG
Sbjct: 92  RWIVLGLIVVALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVG 151

Query: 88  AYACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLAAQFFLVWL 147
           AY+ Y L++ +  L+  IC+ + G++ A  G L G P LR++G YLA+ TL     ++ L
Sbjct: 152 AYS-YALLSHYFGLSFWICLPIAGMMAATFGFLLGFPVLRLRGDYLAIVTLGFGE-IIRL 209

Query: 148 FNKVPWFYNYSASGQINAPERTMFGYAITGPNADAAPKY----------------LFCLA 191
           F +         +G  N  + T FG       A+    +                L+ +A
Sbjct: 210 FLRNLTDITGGPNGISNIEKPTFFGLTFERKAAEGLQTFHEYFGLEYNSINKVIFLYLVA 269

Query: 192 FLFVLA--WLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGA 249
            L  LA  ++   L R  IGR+W A+R+ +IA   +G+NP   KL+AF + + F G AG+
Sbjct: 270 LLLALAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGS 329

Query: 250 LFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVGS 309
            FF+   G V   E+F   +S ++L ++++GG+GS  G +  A  ++LLP +++      
Sbjct: 330 -FFAARQGLV-TPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPEMMREF---- 383

Query: 310 LGWDTAIAAHFEFVVLGGLIIFFLIVEPHGL 340
                   + +  ++ G L++  +I  P GL
Sbjct: 384 --------SEYRMLMFGALMVLMMIWRPQGL 406