Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 373 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  217 bits (552), Expect = 5e-61
 Identities = 138/376 (36%), Positives = 205/376 (54%), Gaps = 30/376 (7%)

Query: 4   REAGDFKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPF--------------VINDYWA 49
           R  GDF+TSY AD++ F     R      L    G++                +  D +A
Sbjct: 7   RPCGDFRTSYRADTKIFDTPTSRWAMVGFLCALYGLVILPQAFPPLASLPVLRLFADGYA 66

Query: 50  SAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLL 109
            ++ +    +AIAA+GLNIL G+ GQ+SLG   F  VGA++   L T    L + +C+ L
Sbjct: 67  LSLGIQVCYYAIAALGLNILVGFTGQISLGHAAFFGVGAFSSAWLNTRV-GLPVLVCIPL 125

Query: 110 GGVITAAVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFYNYSASGQINAPERT 169
            G+++AA G+LFG P+ RIKG YLA+ATLAAQF +  LF ++ WF   S+    + P   
Sbjct: 126 AGLMSAAAGLLFGAPAARIKGLYLAIATLAAQFIIEDLFVRMDWFTGGSSGAMADTPMLG 185

Query: 170 MFGYAITGPNADAAPKYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNP 229
            F +       + A  +L  L+F  VL  +A NL R   GR+++A+RD  ++AE++G+  
Sbjct: 186 SFAF------DNDARYFLLSLSFTIVLFVMAANLMRSRDGRAFVALRDHYLSAEVMGIAL 239

Query: 230 LKAKLTAFAVSSFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSL 289
            + ++ +F +++F+ G+ GAL +  YL  V   EAF I  S   L MIIIGGLGS+ G++
Sbjct: 240 TRYRVMSFGIAAFYAGIGGAL-YGHYLMFVS-AEAFTILLSIQFLGMIIIGGLGSVMGAM 297

Query: 290 AGAAFIVLLPVLLKNVMVG--SLGWDTAIAA-----HFEFVVLGGLIIFFLIVEPHGLAR 342
            G  F+V LP ++  V+    +  W    A       F  + +G  II FLI EP GLA 
Sbjct: 298 LGTIFMVALPEVMGAVIAALQTTQWGNRPAVINGLPFFREMAIGAAIILFLIFEPDGLAH 357

Query: 343 LWQLAKEKLRLWPFPH 358
            W+L K   +L+PF H
Sbjct: 358 RWRLIKTYWKLYPFSH 373