Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 452 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  135 bits (339), Expect = 3e-36
 Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%)

Query: 31  LVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90
           LVLA+   I PF  N Y+   V   ++I+ +   GLNI+ G  G + LG   F AVGAY+
Sbjct: 119 LVLAIVFPITPFS-NRYYVD-VATTWMIYIMLGWGLNIVVGLAGLLDLGYVAFYAVGAYS 176

Query: 91  CYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLA-AQFFLVWLFN 149
            Y L++     +  +C+ L GV  A  GV+ G P LR++G YLA+ TL   +   V L N
Sbjct: 177 -YALLSQTFGWSFWVCLPLAGVFAAFFGVVLGFPVLRLRGDYLAIVTLGFGEIIRVVLLN 235

Query: 150 KVPWFYNYSASGQINAPERTMF---GYAITGPNADAAPKYLFCLA--------FLFVLAW 198
              W+   +    I+  ER  F    +A T P         F ++        FLF L  
Sbjct: 236 ---WYAVTNGPDGISGIERPSFFGLDFARTAPEGGETFHQFFGISYSPDHRVIFLFYLIL 292

Query: 199 LARNLT--------RGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGAL 250
               LT        R  +GR+W A+R+ +IA   +G+NP   KL+AFA+ + F G AG+ 
Sbjct: 293 ALAVLTNIFTGRIRRLPVGRAWEALREDEIACRSLGINPTNVKLSAFALGAMFGGFAGS- 351

Query: 251 FFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVGSL 310
           FF+   G +   E+F   +S ++L ++++GG+GS  G +  A F+V+LP + +       
Sbjct: 352 FFATRQGFIS-PESFTFMESAVILAIVVLGGMGSQIGVVIAAFFLVVLPEVFREF----- 405

Query: 311 GWDTAIAAHFEFVVLGGLIIFFLIVEPHGL 340
                    F     G  ++  ++  P GL
Sbjct: 406 -------DQFRMFFFGAAMVAVMVWRPRGL 428