Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 429 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Rahnella sp. WP5

 Score =  141 bits (355), Expect = 4e-38
 Identities = 101/330 (30%), Positives = 166/330 (50%), Gaps = 38/330 (11%)

Query: 31  LVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90
           LVL +A    PF+++        +  LI+ +  +GLN++ G  G + LG GGF A+GAY 
Sbjct: 94  LVLIIAAIAWPFIVSRGTVDIATLT-LIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGAYT 152

Query: 91  CYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLA-AQFFLVWLFN 149
            Y L+  +  +     + L G+++AA G L G P LR++G YLA+ TL   +   + L N
Sbjct: 153 -YALLNHYYGIGFWEALPLAGLVSAAFGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLN 211

Query: 150 KVPWFYNYSASGQINAPERTMFGYAITGPNADAA-------------PK----YLFCLAF 192
                   +   QI  P+ T+FG   +    D               P     +L+ +A 
Sbjct: 212 NTELTGGPNGISQI--PKPTLFGLEFSRTPRDGGWDTFSNFFNVTYDPSDRIIFLYMVAL 269

Query: 193 LFVLA--WLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGAL 250
           L V+A  ++   L R  +GR+W A+R+ +IA   +G+NP + KLTAF +S+ F G AG L
Sbjct: 270 LLVIATLFIINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTL 329

Query: 251 FFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVGSL 310
            F+   G V   E+F   +S  VL ++++GG+GS F  +  A  +V+   L++++     
Sbjct: 330 -FAARQGFVS-PESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDL----- 382

Query: 311 GWDTAIAAHFEFVVLGGLIIFFLIVEPHGL 340
                    +  ++LG L++  +I  P GL
Sbjct: 383 -------NEYSMLLLGALMVLMMIWRPQGL 405